RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 PYGO1Q9Y3Y4 419 aa4.39□□□□□ -1.71
COPA-203ENST00000481040 TRAV25A0A0B4J276 109 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 TRGV8A0A0C4DH27 118 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 ARHGEF33A8MVX0 844 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 LMX1BO60663 402 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 KRT36O76013 467 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 H6PDO95479 791 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 IGHG4P01861 327 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 RHOXF2BP0C7M4 288 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 OTX1P32242 354 aaPredicted RBP4.38□□□□□ -1.71
COPA-203ENST00000481040 CDH5P33151 784 aaPredicted RBP4.38□□□□□ -1.71
COPA-203ENST00000481040 RPS5P46782 204 aaKnown RBP4.38□□□□□ -1.71
COPA-203ENST00000481040 HSPA2P54652 639 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 CDK16Q00536 496 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 MECOMQ03112 1051 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 DMTNQ08495 405 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 ST3GAL3Q11203 375 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 NECTIN1Q15223 517 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 SBK1Q52WX2 424 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 MS4A13Q5J8X5 152 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 ADAMTSL4-AS1Q5T5F5 129 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 REP15Q6BDI9 236 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 PVRIGQ6DKI7 326 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 TMEM53Q6P2H8 277 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 ENPP6Q6UWR7 440 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 PRSS33Q8NF86 280 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 OR2T33Q8NG76 320 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 OR7G2Q8NG99 324 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 RFESDQ8TAC1 157 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 TMEM190Q8WZ59 177 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 NUS1Q96E22 293 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 RHOXF2Q9BQY4 288 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 C20orf24Q9BUV8 137 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 PLCXD1Q9NUJ7 323 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 WRAP73Q9P2S5 460 aaPredicted RBP4.38□□□□□ -1.71
COPA-203ENST00000481040 PEF1Q9UBV8 284 aaKnown RBP4.38□□□□□ -1.71
COPA-203ENST00000481040 MLXQ9UH92 298 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 TBC1D24Q9ULP9 559 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 NTNG1Q9Y2I2 539 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 STARD10Q9Y365 291 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 PEX16Q9Y5Y5 336 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 SALL1Q9NSC2 1324 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 INSRP06213 1382 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 PIK3R4Q99570 1358 aa4.38□□□□□ -1.71
COPA-203ENST00000481040 LINC00854A0A1B0GVQ3 168 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 A0A1W2PPV9 198 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 MEIOCA2RUB1 952 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 BMPR1BO00238 502 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 FCN1O00602 326 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 RGS16O15492 202 aaPredicted RBP4.37□□□□□ -1.71
COPA-203ENST00000481040 IGHV3-9P01782 118 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 PATE4P0C8F1 98 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 POLR2EP19388 210 aaKnown RBP4.37□□□□□ -1.71
COPA-203ENST00000481040 CPN2P22792 545 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 CCKARP32238 428 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 MAP3K8P41279 467 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 NAMPTP43490 491 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 QARSP47897 775 aaKnown RBP4.37□□□□□ -1.71
COPA-203ENST00000481040 CSNK1EP49674 416 aaKnown RBP4.37□□□□□ -1.71
COPA-203ENST00000481040 STARP49675 285 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 KRTAP10-11P60412 298 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 RND3P61587 244 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 SRPXP78539 464 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 FKBP3Q00688 224 aaKnown RBP4.37□□□□□ -1.71
COPA-203ENST00000481040 ZNF154Q13106 437 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 CUL1Q13616 776 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 VGLL4Q14135 290 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 TGFBIQ15582 683 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 CYP51A1Q16850 503 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 ZNF718Q3SXZ3 478 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 ZNF585BQ52M93 769 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 HIKESHIQ53FT3 197 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 AGBL2Q5U5Z8 902 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 HPS6Q86YV9 775 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 ATP6V0D2Q8N8Y2 350 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 SERAC1Q96JX3 654 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 IFT74Q96LB3 600 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 CLCC1Q96S66 551 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 EPYCQ99645 322 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 RAB34Q9BZG1 259 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 ILKAPQ9H0C8 392 aaPredicted RBP4.37□□□□□ -1.71
COPA-203ENST00000481040 XKR8Q9H6D3 395 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 ZNF556Q9HAH1 456 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 NMRAL1Q9HBL8 299 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 MRPL22Q9NWU5 206 aaKnown RBP4.37□□□□□ -1.71
COPA-203ENST00000481040 FAM120CQ9NX05 1096 aaKnown RBP4.37□□□□□ -1.71
COPA-203ENST00000481040 BFARQ9NZS9 450 aa4.37□□□□□ -1.71
COPA-203ENST00000481040 TRBV11-1A0A0K0K1C0 115 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.36□□□□□ -1.71
COPA-203ENST00000481040 TEX48A0A1B0GUV7 120 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.36□□□□□ -1.71
COPA-203ENST00000481040 TRABD2BA6NFA1 517 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 SAGE2PA6NJ88 616 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 MPTX1A8MV57 137 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 DLGAP1O14490 977 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 TFECO14948 347 aaPredicted RBP4.36□□□□□ -1.71
COPA-203ENST00000481040 UGT2B17O75795 530 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 FLOT1O75955 427 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 OR2F2O95006 317 aa4.36□□□□□ -1.71
COPA-203ENST00000481040 LGI1O95970 557 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms