RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 SIRPAP78324 504 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 QPRTQ15274 297 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 TOMM34Q15785 309 aaPredicted RBP15.25■□□□□ 0.03
HSPG2-209ENST00000480900 SLC25A53Q5H9E4 307 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 HBMQ6B0K9 141 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 EPGNQ6UW88 154 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 FRRS1Q6ZNA5 592 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 ZNF621Q6ZSS3 439 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 MSANTD1Q6ZTZ1 278 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 EIF3MQ7L2H7 374 aaKnown RBP15.25■□□□□ 0.03
HSPG2-209ENST00000480900 OLIG3Q7RTU3 272 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 LILRA2Q8N149 483 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 ZNF619Q8N2I2 560 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 GOLGA6L1Q8N7Z2 621 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 FAM71CQ8NEG0 241 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 RFWD2Q8NHY2 731 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 GPATCH1Q9BRR8 931 aaKnown RBP15.25■□□□□ 0.03
HSPG2-209ENST00000480900 POLDIP3Q9BY77 421 aaKnown RBP15.25■□□□□ 0.03
HSPG2-209ENST00000480900 PRRG4Q9BZD6 226 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 RASSF1Q9NS23 344 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 DNAJB12Q9NXW2 375 aaKnown RBP15.25■□□□□ 0.03
HSPG2-209ENST00000480900 LIPT1Q9Y234 373 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 SLC35A3Q9Y2D2 325 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 ROS1P08922 2347 aa15.25■□□□□ 0.03
HSPG2-209ENST00000480900 EFNA2O43921 213 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 CGAP01215 116 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 ZCCHC18P0CG32 403 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 CD8BP10966 210 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 SHC1P29353 583 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 SFTPDP35247 375 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 CPOXP36551 454 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 MRPL19P49406 292 aaKnown RBP15.24■□□□□ 0.03
HSPG2-209ENST00000480900 SELENBP1Q13228 472 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 MAPK14Q16539 360 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 GPAT3Q53EU6 434 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 PPP4R4Q6NUP7 873 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 FAM214BQ7L5A3 538 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 MIER2Q8N344 545 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 LINC01560Q8TB33 94 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 ST8SIA1Q92185 356 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 OSTF1Q92882 214 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 GMPPAQ96IJ6 420 aaPredicted RBP15.24■□□□□ 0.03
HSPG2-209ENST00000480900 DACH2Q96NX9 599 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 TRNT1Q96Q11 434 aaKnown RBP15.24■□□□□ 0.03
HSPG2-209ENST00000480900 RMND5AQ9H871 391 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 SLCO1B3Q9NPD5 702 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 TIGARQ9NQ88 270 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 GLRX2Q9NS18 164 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 EMC9Q9Y3B6 208 aa15.24■□□□□ 0.03
HSPG2-209ENST00000480900 HIVEP1P15822 2718 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 PRAMEF27A3QJZ7 478 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 POLR3GO15318 223 aaPredicted RBP15.23■□□□□ 0.03
HSPG2-209ENST00000480900 H6PDO95479 791 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 KRT75O95678 551 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 PLGP00747 810 aaPredicted RBP15.23■□□□□ 0.03
HSPG2-209ENST00000480900 C1QCP02747 245 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 GSNP06396 782 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 PGM1P36871 562 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 CD79BP40259 229 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 POLR2JP52435 117 aaKnown RBP15.23■□□□□ 0.03
HSPG2-209ENST00000480900 CARD18P57730 90 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 ZNF474Q6S9Z5 364 aaPredicted RBP15.23■□□□□ 0.03
HSPG2-209ENST00000480900 OR9I1Q8NGQ6 314 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 OR6K3Q8NGY3 331 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 DYDC1Q8WWB3 177 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 CPNE4Q96A23 557 aaPredicted RBP15.23■□□□□ 0.03
HSPG2-209ENST00000480900 ZNF524Q96C55 264 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 SLC39A3Q9BRY0 314 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 THUMPD3Q9BV44 507 aaKnown RBP15.23■□□□□ 0.03
HSPG2-209ENST00000480900 OPN3Q9H1Y3 402 aaPredicted RBP15.23■□□□□ 0.03
HSPG2-209ENST00000480900 CLEC4MQ9H2X3 399 aaPredicted RBP15.23■□□□□ 0.03
HSPG2-209ENST00000480900 TCF7L2Q9NQB0 619 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 ELOVL5Q9NYP7 299 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 PROCRQ9UNN8 238 aa15.23■□□□□ 0.03
HSPG2-209ENST00000480900 ITPR3Q14573 2671 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 MAP1AP78559 2803 aaPredicted RBP15.22■□□□□ 0.03
HSPG2-209ENST00000480900 FAM234BA2RU67 622 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 SH3D21A4FU49 640 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 SS18L1O75177 396 aaPredicted RBP15.22■□□□□ 0.03
HSPG2-209ENST00000480900 CYP7B1O75881 506 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 PABPC4LP0CB38 370 aaKnown RBP15.22■□□□□ 0.03
HSPG2-209ENST00000480900 UBTFL6P0CB48 400 aaPredicted RBP15.22■□□□□ 0.03
HSPG2-209ENST00000480900 PGCP20142 388 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 CTBP2P56545 445 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 STX1BP61266 288 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 PPP2R2AP63151 447 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 CHRNEQ04844 493 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 ZNF239Q16600 458 aaKnown RBP15.22■□□□□ 0.03
HSPG2-209ENST00000480900 TMEM176BQ3YBM2 270 aaPredicted RBP15.22■□□□□ 0.03
HSPG2-209ENST00000480900 TIGD2Q4W5G0 525 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 COX20Q5RI15 118 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 GTF2IRD2BQ6EKJ0 949 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 DNAJC14Q6Y2X3 702 aaPredicted RBP15.22■□□□□ 0.03
HSPG2-209ENST00000480900 LRRC74BQ6ZQY2 392 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 GTF2IRD2Q86UP8 949 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 ANKFN1Q8N957 763 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 ZFP90Q8TF47 636 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 TMEM234Q8WY98 164 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 PMM1Q92871 262 aa15.22■□□□□ 0.03
HSPG2-209ENST00000480900 ITCHQ96J02 903 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms