RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	COL9A2	Q14055	689 aa	Predicted RBP	4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	SCARB2	Q14108	478 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	MFSD13A	Q14CX5	517 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	GUSBP1	Q15486	140 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	CD226	Q15762	336 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	HSPB2	Q16082	182 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	NRF1	Q16656	503 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	SLC25A35	Q3KQZ1	300 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ANKDD1A	Q495B1	522 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	GXYLT1	Q4G148	440 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	GPAT3	Q53EU6	434 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	PRR30	Q53SZ7	412 aa	Predicted RBP	4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	EMC4	Q5J8M3	183 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	COX20	Q5RI15	118 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	PDSS1	Q5T2R2	415 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	PDZK1	Q5T2W1	519 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	GTF2IRD2B	Q6EKJ0	949 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	WBP2NL	Q6ICG8	309 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZNF613	Q6PF04	617 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	FIGNL1	Q6PIW4	674 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	C16orf89	Q6UX73	402 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	B3GNT6	Q6ZMB0	384 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZAR1	Q86SH2	424 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	GTF2IRD2	Q86UP8	949 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	SNX32	Q86XE0	403 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	DOLPP1	Q86YN1	238 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	SLC15A3	Q8IY34	581 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZZZ3	Q8IYH5	903 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ULK2	Q8IYT8	1036 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	PRR22	Q8IZ63	422 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	SLC43A2	Q8N370	569 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	MEIOB	Q8N635	442 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ADPRHL1	Q8NDY3	354 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	OR2T12	Q8NG77	320 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	DUSP19	Q8WTR2	217 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	SSC4D	Q8WTU2	575 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	NUDT8	Q8WV74	236 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ABTB1	Q969K4	478 aa	Predicted RBP	4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	CPNE4	Q96A23	557 aa	Predicted RBP	4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	WDYHV1	Q96HA8	205 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	BOD1	Q96IK1	185 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	MPP4	Q96JB8	637 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ADGRG7	Q96K78	797 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	MARK4	Q96L34	752 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZNF583	Q96ND8	569 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ECSIT	Q9BQ95	431 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ZNF426	Q9BUY5	554 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	THUMPD3	Q9BV44	507 aa	Known RBP	4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	UGT2B28	Q9BY64	529 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	POTEKP	Q9BYX7	375 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	RTN4R	Q9BZR6	473 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ALG2	Q9H553	416 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ANKRD19P	Q9H560	264 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	IKZF5	Q9H5V7	419 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	GORASP2	Q9H8Y8	452 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	GALNT9	Q9HCQ5	603 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	FANCF	Q9NPI8	374 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	TIGAR	Q9NQ88	270 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	SERINC1	Q9NRX5	453 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	MED17	Q9NVC6	651 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	SLAMF8	Q9P0V8	285 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	TMEM181	Q9P2C4	612 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	CLCF1	Q9UBD9	225 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	TAGLN3	Q9UI15	199 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	DKKL1	Q9UK85	242 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	FBXL2	Q9UKC9	423 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	PRPF19	Q9UMS4	504 aa	Known RBP	4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	NPIPA1	Q9UND3	350 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	KCNE3	Q9Y6H6	103 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	UNC79	Q9P2D8	2635 aa		4.6	□□□□□ -1.67
HDAC6-223	ENST00000480525	ELOVL7	A1L3X0	281 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	NPIPB13	A6NJU9	1138 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	TMEM229A	B2RXF0	380 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	NPIPB4	C9JG80	1138 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	GTPBP1	O00178	669 aa	Known RBP	4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	SCO2	O43819	266 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	OR2T1	O43869	369 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	EIF1B	O60739	113 aa	Known RBP	4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	ATP5H	O75947	161 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	VAMP5	O95183	116 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	RCBTB2	O95199	551 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	F10	P00742	488 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	GSN	P06396	782 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	CD8B	P10966	210 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	PNMT	P11086	282 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	HK1	P19367	917 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	EFNA1	P20827	205 aa	Predicted RBP	4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	CHRNB4	P30926	498 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	ACAA2	P42765	397 aa	Known RBP	4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	KCNJ5	P48544	419 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	RASSF2	P50749	326 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	AGFG1	P52594	562 aa	Known RBP	4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	SLC16A1	P53985	500 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	NME5	P56597	212 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	COPZ1	P61923	177 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	RPS26	P62854	115 aa	Known RBP	4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	SELENOW	P63302	87 aa		4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	CSNK2A1	P68400	391 aa	Predicted RBP	4.59	□□□□□ -1.67
HDAC6-223	ENST00000480525	ABCA4	P78363	2273 aa		4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms