RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	DHDDS	Q86SQ9	333 aa		14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	SLC44A2	Q8IWA5	706 aa	Predicted RBP	14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	GPR151	Q8TDV0	419 aa		14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	JADE3	Q92613	823 aa		14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	DIO2	Q92813	273 aa		14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	HOXB13	Q92826	284 aa	Predicted RBP	14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	TUBA1C	Q9BQE3	449 aa		14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	ANGPTL4	Q9BY76	406 aa		14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	PIGU	Q9H490	435 aa		14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	TPT1P8	Q9HAU6	139 aa		14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	EQTN	Q9NQ60	294 aa		14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	TAGLN3	Q9UI15	199 aa		14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	LIPT1	Q9Y234	373 aa		14.02	□□□□□ -0.17
HDLBP-238	ENST00000479894	CLIC1	O00299	241 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	SNPH	O15079	494 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	NKX2-2	O95096	273 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	GSN	P06396	782 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	CRH	P06850	196 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	GABRA3	P34903	492 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	IDUA	P35475	653 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	GCK	P35557	465 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	SOX18	P35713	384 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	CLK3	P49761	638 aa	Known RBP	14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	RUNX1T1	Q06455	604 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	PLCXD2	Q0VAA5	305 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	LASP1	Q14847	261 aa	Known RBP	14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	EIPR1	Q53HC9	387 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	FNDC7	Q5VTL7	733 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	HACD2	Q6Y1H2	254 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	NUP54	Q7Z3B4	507 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	PACS2	Q86VP3	889 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	ZNF611	Q8N823	705 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	COX18	Q8N8Q8	333 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	DOK4	Q8TEW6	326 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	ZFP90	Q8TF47	636 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	SLC9A6	Q92581	669 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	PMM1	Q92871	262 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	DTNBP1	Q96EV8	351 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	HOPX	Q9BPY8	73 aa	Predicted RBP	14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	INPP5K	Q9BT40	448 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	BTBD2	Q9BX70	525 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	ITPA	Q9BY32	194 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	PAIP1	Q9H074	479 aa	Known RBP	14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	GPATCH2	Q9NW75	528 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	ELOVL5	Q9NYP7	299 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	CALML5	Q9NZT1	146 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	CLCF1	Q9UBD9	225 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	PCDHB14	Q9Y5E9	798 aa		14.01	□□□□□ -0.17
HDLBP-238	ENST00000479894	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	GUSB	P08236	651 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	CT45A8	P0DMV1	189 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	CT45A9	P0DMV2	189 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	ATP6V1C1	P21283	382 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	IL12B	P29460	328 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	UGT2B10	P36537	528 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	MASP1	P48740	699 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	PNLIPRP2	P54317	469 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	POU6F2	P78424	691 aa	Predicted RBP	14	□□□□□ -0.17
HDLBP-238	ENST00000479894	HPCA	P84074	193 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	CT45A2	Q5DJT8	189 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	TRPM8	Q7Z2W7	1104 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	BTLA	Q7Z6A9	289 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	GCNT2	Q8N0V5	402 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	METTL25	Q8N6Q8	603 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	OR8J3	Q8NGG0	315 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	OR5AK3P	Q8NH89	298 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	OIT3	Q8WWZ8	545 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	LRRC58	Q96CX6	371 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	TMCO6	Q96DC7	493 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	GIMAP5	Q96F15	307 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	TMEM41A	Q96HV5	264 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	GNRHR2	Q96P88	292 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	CGREF1	Q99674	301 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	PIGQ	Q9BRB3	760 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	THUMPD3	Q9BV44	507 aa	Known RBP	14	□□□□□ -0.17
HDLBP-238	ENST00000479894	SPATA9	Q9BWV2	254 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	HOXD1	Q9GZZ0	328 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	NXF5	Q9H1B4	397 aa	Known RBP	14	□□□□□ -0.17
HDLBP-238	ENST00000479894	POLE3	Q9NRF9	147 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	TMEM160	Q9NX00	188 aa		14	□□□□□ -0.17
HDLBP-238	ENST00000479894	PRR14L	Q5THK1	2151 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	NUP214	P35658	2090 aa	Predicted RBP	13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894		A0A1W2PNV4	684 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	OR6C70	A6NIJ9	312 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	HNRNPCL1	O60812	293 aa	Known RBP	13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	REM1	O75628	298 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	PPM1B	O75688	479 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	ABCD3	P28288	659 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	CCKAR	P32238	428 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	MAP3K8	P41279	467 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	CDKN2C	P42773	168 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	CRAT	P43155	626 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	PSG6	Q00889	435 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	TOMM20	Q15388	145 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	BEX5	Q5H9J7	111 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	PAGE3	Q5JUK9	113 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	REP15	Q6BDI9	236 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	ENPP6	Q6UWR7	440 aa		13.99	□□□□□ -0.17
HDLBP-238	ENST00000479894	DLEU7	Q6UYE1	221 aa		13.99	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms