RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 GPR119Q8TDV5 335 aa12.88□□□□□ -0.35
SMARCE1-209ENST00000478349 ROBO4Q8WZ75 1007 aa12.88□□□□□ -0.35
SMARCE1-209ENST00000478349 ZHX1-C8orf76Q96EF9 292 aa12.88□□□□□ -0.35
SMARCE1-209ENST00000478349 SLC35G5Q96KT7 338 aa12.88□□□□□ -0.35
SMARCE1-209ENST00000478349 OR7D2Q96RA2 312 aa12.88□□□□□ -0.35
SMARCE1-209ENST00000478349 POLE3Q9NRF9 147 aa12.88□□□□□ -0.35
SMARCE1-209ENST00000478349 EMC3Q9P0I2 261 aa12.88□□□□□ -0.35
SMARCE1-209ENST00000478349 GIMAP2Q9UG22 337 aa12.88□□□□□ -0.35
SMARCE1-209ENST00000478349 RNF115Q9Y4L5 304 aa12.88□□□□□ -0.35
SMARCE1-209ENST00000478349 NAV3Q8IVL0 2385 aa12.88□□□□□ -0.35
SMARCE1-209ENST00000478349 MED12LQ86YW9 2145 aa12.88□□□□□ -0.35
SMARCE1-209ENST00000478349 MPDZO75970 2070 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 SERINC4A6NH21 518 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 NPIPB9F8W1W9 429 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 ANKRD28O15084 1053 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 KLF4O43474 513 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 CSTAP01040 98 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 SERPINE1P05121 402 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 CD3EP07766 207 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 PAX1P15863 534 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 PGCP20142 388 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 MATN1P21941 496 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 ENPP1P22413 925 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 FKBP2P26885 142 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 ANXA11P50995 505 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 CLNS1AP54105 237 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 RPS4XP62701 263 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 HBA1P69905 142 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 PPP2R2BQ00005 443 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 QPRTQ15274 297 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 SLC25A53Q5H9E4 307 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 PDZK1Q5T2W1 519 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 TUSC5Q8IXB3 177 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 RIMKLAQ8IXN7 391 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 LRRC34Q8IZ02 419 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 KRTCAP2Q8N6L1 136 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 ATP6V1C2Q8NEY4 427 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 NUDT8Q8WV74 236 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 FBXW5Q969U6 566 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 S100PBPQ96BU1 408 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 TRMT61AQ96FX7 289 aaKnown RBP12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 C3orf30Q96M34 536 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 DPY30Q9C005 99 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 LAT2Q9GZY6 243 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 ANKZF1Q9H8Y5 726 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 ZDHHC2Q9UIJ5 367 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 SLC35A3Q9Y2D2 325 aa12.87□□□□□ -0.35
SMARCE1-209ENST00000478349 NPIPA5A0A0B4J1W7 369 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 NPIPA7E9PJI5 369 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 ETV2O00321 342 aaPredicted RBP12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 TM9SF1O15321 606 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 BIRC5O15392 142 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 RGS16O15492 202 aaPredicted RBP12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 CYP7B1O75881 506 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 CNOT4O95628 575 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 GUSBP08236 651 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 NPIPA8P0DM63 369 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 LOXP28300 417 aaPredicted RBP12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 KHKP50053 298 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 ATP5J2P56134 94 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 VSNL1P62760 191 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 TXNL4AP83876 142 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 ITGADQ13349 1161 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 CAPRIN1Q14444 709 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 GPR68Q15743 365 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 ZNF141Q15928 474 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 PDCD2Q16342 344 aaPredicted RBP12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 ARHGAP11BQ3KRB8 267 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 KRT71Q3SY84 523 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 SFRP5Q5T4F7 317 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 ALKBH2Q6NS38 261 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 ADAM5Q6NVV9 412 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 Q6ZT83 130 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 C6orf120Q7Z4R8 191 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 GABRG1Q8N1C3 465 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 OR8J2Q8NGG1 315 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 OR5D16Q8NGK9 328 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 OR4A15Q8NGL6 344 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 MUCL1Q96DR8 90 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 SDF2Q99470 211 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 NPAS1Q99742 590 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 TMEM204Q9BSN7 226 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 TMEM109Q9BVC6 243 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 SRXN1Q9BYN0 137 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 ZNF350Q9GZX5 532 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 COQ10BQ9H8M1 238 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 BCO1Q9HAY6 547 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 SSU72Q9NP77 194 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 ZNF701Q9NV72 531 aaPredicted RBP12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 FAIMQ9NVQ4 179 aa12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 NIPBLQ6KC79 2804 aaeCLIP12.86□□□□□ -0.35
SMARCE1-209ENST00000478349 SMAD7O15105 426 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 CLOCKO15516 846 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 TYROBPO43914 113 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 GCM2O75603 506 aaPredicted RBP12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 NTN1O95631 604 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 UQCRC2P22695 453 aa12.85□□□□□ -0.35
SMARCE1-209ENST00000478349 SHC1P29353 583 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms