RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ASPGQ86U10 573 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 AKAP14Q86UN6 197 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 TRIM73Q86UV7 250 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 COMTD1Q86VU5 262 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 AMIGO1Q86WK6 493 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PAQR7Q86WK9 346 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 CACUL1Q86Y37 369 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 KIF18BQ86Y91 864 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PHC2Q8IXK0 858 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 LRRC25Q8N386 305 aaPredicted RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 CLIP4Q8N3C7 705 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 IQCF1Q8N6M8 205 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 CLDN22Q8N7P3 220 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 OR9A2Q8NGT5 310 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 OR52P1PQ8NH57 321 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ADAMTS15Q8TE58 950 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 LCN9Q8WX39 176 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ACOT11Q8WXI4 607 aaPredicted RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ZCCHC14Q8WYQ9 949 aaKnown RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 AP3S1Q92572 193 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 HTRA1Q92743 480 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 DIO2Q92813 273 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PMM1Q92871 262 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 KLK6Q92876 244 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 OSTF1Q92882 214 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 UFD1Q92890 307 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 FGF11Q92914 225 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 RFKQ969G6 155 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 KIAA1143Q96AT1 154 aaPredicted RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ELSPBP1Q96BH3 223 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 SLC22A18Q96BI1 424 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ELP4Q96EB1 424 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 CHFRQ96EP1 664 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 RNFT2Q96EX2 444 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 CNRIP1Q96F85 164 aaPredicted RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 LRR1Q96L50 414 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ZNF681Q96N22 645 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 MS4A4EQ96PG1 132 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 SERINC2Q96SA4 455 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 NELL2Q99435 816 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 COQ7Q99807 217 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 KCNS3Q9BQ31 491 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 WFDC6Q9BQY6 131 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 MED18Q9BUE0 208 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 CNPPD1Q9BV87 410 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PLA2G2FQ9BZM2 168 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 SYNDIG1Q9H7V2 258 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 EVA1AQ9H8M9 152 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PRDM8Q9NQV8 689 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 INIPQ9NRY2 104 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 OR6C2Q9NZP2 312 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 NPAP1Q9NZP6 1156 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 NTMQ9P121 344 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 CLEC1BQ9P126 229 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 SERGEFQ9UGK8 458 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 APOBEC3BQ9UH17 382 aaKnown RBP4.59□□□□□ -1.67
SF3B6-202ENST00000478050 CLEC2DQ9UHP7 191 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 TCFL5Q9UL49 500 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 SCML1Q9UN30 329 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 GSTK1Q9Y2Q3 226 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 CMAHPQ9Y471 501 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PLEKHM1Q9Y4G2 1056 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 PCDHGB2Q9Y5G2 931 aa4.59□□□□□ -1.67
SF3B6-202ENST00000478050 ASPMQ8IZT6 3477 aa4.59□□□□□ -1.68
SF3B6-202ENST00000478050 MYO9AB2RTY4 2548 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 ASXL3Q9C0F0 2248 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 TRDV1A0A1B0GX56 115 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 PRSS38A1L453 326 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 CPSF4LA6NMK7 179 aaKnown RBP4.58□□□□□ -1.68
SF3B6-202ENST00000478050 OR52A4PA6NMU1 304 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 CTDSP2O14595 271 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 RGS5O15539 181 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 CHST10O43529 356 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 LATO43561 262 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 B3GALT2O43825 422 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 PRKRAO75569 313 aaKnown RBP4.58□□□□□ -1.68
SF3B6-202ENST00000478050 CDRT1O95170 752 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 APBB3O95704 486 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 STATHP02808 62 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 HMGN1P05114 100 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 SLC35G6P0C7Q6 338 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 C8orf89P0DMQ9 161 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 SMIM10L1P0DMW3 83 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 ALPPL2P10696 532 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 SPNP16150 400 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 CPN2P22792 545 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 NTSR1P30989 418 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 TLX1P31314 330 aaPredicted RBP4.58□□□□□ -1.68
SF3B6-202ENST00000478050 FGF9P31371 208 aaPredicted RBP4.58□□□□□ -1.68
SF3B6-202ENST00000478050 GABRA5P31644 462 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 LTBRP36941 435 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 ETV5P41161 510 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 CASP3P42574 277 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 OMPP47874 163 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 MTNR1AP48039 350 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 ETV1P50549 477 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 ADPRHP54922 357 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 CDH11P55287 796 aa4.58□□□□□ -1.68
SF3B6-202ENST00000478050 TPTEP56180 551 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms