RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SCN8AQ9UQD0 1980 aa3.36□□□□□ -1.87
UBR3-209ENST00000477461 DOCK9Q9BZ29 2069 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 NOTCH2Q04721 2471 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 PLXNA2O75051 1894 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 SPAG17Q6Q759 2223 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 CHD7Q9P2D1 2997 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 EML5Q05BV3 1969 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 IGHV1OR15-9A0A0B4J2B8 117 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 A0A0U1RQS6 177 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 EXOC1LA0A1B0GW35 172 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 MEX3AA1L020 520 aaKnown RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 IGLON5A6NGN9 336 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 GOLGA6L10A6NI86 522 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 CCL22O00626 93 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 FPGTO14772 594 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 SLC31A1O15431 190 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 RIPK2O43353 540 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 SRP72O76094 671 aaKnown RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 NXPH2O95156 264 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 VAPBO95292 243 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 GOT2P00505 430 aaKnown RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 IGLV3-19P01714 112 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 PCCBP05166 539 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 ABHD2P08910 425 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 RALBP11234 206 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 OGNP20774 298 aaKnown RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 LHCGRP22888 699 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 PTAFRP25105 342 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 SSTR1P30872 391 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 HOXA6P31267 233 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 AKT2P31751 481 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 HSD17B3P37058 310 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 GPR1P46091 355 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 SPINT3P49223 89 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 DHPSP49366 369 aaPredicted RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 TTPAP49638 278 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 ZNF140P52738 457 aaPredicted RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 CACNG1Q06432 222 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 NAB1Q13506 487 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 FASTKD3Q14CZ7 662 aaKnown RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 UAP1Q16222 522 aaPredicted RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 KLHL38Q2WGJ6 581 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 HLA-BQ31612 363 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 GPR33Q49SQ1 333 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 TMEM31Q5JXX7 168 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 LCN1P1Q5VSP4 162 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 LYPLAL1Q5VWZ2 237 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 STEAP4Q687X5 459 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 SEL1L3Q68CR1 1132 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 ZNF470Q6ECI4 717 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 RAET1GQ6H3X3 334 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 NEPROQ6NW34 567 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 FIP1L1Q6UN15 594 aaKnown RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 FAM151BQ6UXP7 276 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 LPCAT2Q7L5N7 544 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 HSD11B1LQ7Z5J1 315 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 SNX20Q7Z614 316 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 CROCCP2Q86T23 111 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 TMEM135Q86UB9 458 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 TRIM69Q86WT6 500 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 TRAM1L1Q8N609 369 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 TMEM105Q8N8V8 129 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 DENND6BQ8NEG7 585 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 OR10Q1Q8NGQ4 319 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 OR2L2Q8NH16 312 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 OR4L1Q8NH43 312 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 VANGL1Q8TAA9 524 aaPredicted RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 C9orf43Q8TAL5 461 aaPredicted RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 GATAD1Q8WUU5 269 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 HEXDCQ8WVB3 486 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 RLN3Q8WXF3 142 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 KLK6Q92876 244 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 DTD2Q96FN9 168 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 CERS2Q96G23 380 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 DCUN1D1Q96GG9 259 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 CDKN2AIPNLQ96HQ2 116 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 C4orf45Q96LM5 186 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 RAB3IPQ96QF0 476 aaPredicted RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 SMIM14Q96QK8 99 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 CYTH2Q99418 400 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 C19orf43Q9BQ61 176 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 ZSCAN5AQ9BUG6 496 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 RIOK2Q9BVS4 552 aaKnown RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 SLC17A9Q9BYT1 436 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 PRRG4Q9BZD6 226 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 ABCG8Q9H221 673 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 ACTL8Q9H568 366 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 ASB8Q9H765 288 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 SUDS3Q9H7L9 328 aaPredicted RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 PRMT8Q9NR22 394 aaPredicted RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 PHPT1Q9NRX4 125 aaPredicted RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 IARS2Q9NSE4 1012 aaKnown RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 TREX1Q9NSU2 369 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 NINJ2Q9NZG7 142 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 IL17CQ9P0M4 197 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 EPHA6Q9UF33 1036 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 C19orf25Q9UFG5 118 aaPredicted RBP3.35□□□□□ -1.87
UBR3-209ENST00000477461 GIMAP2Q9UG22 337 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 SLC2A6Q9UGQ3 507 aa3.35□□□□□ -1.87
UBR3-209ENST00000477461 CD84Q9UIB8 345 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms