RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 PLOD3O60568 738 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 MAKP20794 623 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 PRKAR1BP31321 381 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 GCGRP47871 477 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 OMPP47874 163 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 OR3A3P47888 321 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 RGS6P49758 472 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 NXPH1P58417 271 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 ZNHIT3Q15649 155 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-221ENST00000477203 PRTGQ2VWP7 1150 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 TBRG1Q3YBR2 411 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 C14orf28Q4W4Y0 310 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 GDPD3Q7L5L3 318 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 OR51L1Q8NGJ5 315 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 OR6F1Q8NGZ6 308 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 THAP3Q8WTV1 239 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-221ENST00000477203 SNAPC3Q92966 411 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 TCTN2Q96GX1 697 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 FYTTD1Q96QD9 318 aaKnown RBP12.38□□□□□ -0.43
HDAC7-221ENST00000477203 SIGLEC11Q96RL6 698 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 ZNF350Q9GZX5 532 aa12.38□□□□□ -0.43
HDAC7-221ENST00000477203 EP300Q09472 2414 aaPredicted RBP12.38□□□□□ -0.43
HDAC7-221ENST00000477203 FAM221BA6H8Z2 402 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 C17orf105B2RV13 164 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 SOCS6O14544 535 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 FOLR1P15328 257 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 ETV5P41161 510 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 FASLGP48023 281 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 ETV1P50549 477 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 SMSP52788 366 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 RPS7P62081 194 aaKnown RBP12.37□□□□□ -0.43
HDAC7-221ENST00000477203 EEF1A1P68104 462 aaKnown RBP12.37□□□□□ -0.43
HDAC7-221ENST00000477203 CD83Q01151 205 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 TBCEQ15813 527 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-221ENST00000477203 FAM69BQ5VUD6 431 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 NPSR1Q6W5P4 371 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 RANBP3LQ86VV4 465 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-221ENST00000477203 ACOT11Q8WXI4 607 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-221ENST00000477203 ZNF582Q96NG8 517 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-221ENST00000477203 OR51V1Q9H2C8 321 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 ADAMTS9Q9P2N4 1935 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 A0A0G2JMP0 313 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 EFCAB10A6NFE3 127 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 E9PQ18 207 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 TSPAN4O14817 238 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 MYL12BO14950 172 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 RFPL3O75679 317 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 MRPL3P09001 348 aaKnown RBP12.37□□□□□ -0.43
HDAC7-221ENST00000477203 SLC35E2P0CK97 266 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 PLAURQ03405 335 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 NDUFA9Q16795 377 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 AGAP6Q5VW22 663 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 C12orf73Q69YU5 71 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 UBE2J2Q8N2K1 259 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 GNPDA2Q8TDQ7 276 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 RNFT2Q96EX2 444 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 AGAP4Q96P64 663 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 PRO3102Q9H379 93 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 MRPS33Q9Y291 106 aaKnown RBP12.37□□□□□ -0.43
HDAC7-221ENST00000477203 CDHR4A6H8M9 788 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 CSO75390 466 aaKnown RBP12.37□□□□□ -0.43
HDAC7-221ENST00000477203 APOA1P02647 267 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 NID1P14543 1247 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 ARFIP1P53367 373 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 PLBD1Q6P4A8 553 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 C16orf47Q6ZP98 133 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-221ENST00000477203 CPOQ8IVL8 374 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 OR8H2Q8N162 312 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 OR5M3Q8NGP4 307 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 DPYSL5Q9BPU6 564 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 SP140LQ9H930 580 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 PLCXD1Q9NUJ7 323 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 QPCTLQ9NXS2 382 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 PLCL2Q9UPR0 1127 aa12.37□□□□□ -0.43
HDAC7-221ENST00000477203 TP53BP1Q12888 1972 aaPredicted RBP12.37□□□□□ -0.43
HDAC7-221ENST00000477203 DBIP07108 87 aaKnown RBP12.36□□□□□ -0.43
HDAC7-221ENST00000477203 HBQ1P09105 142 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 CSF2RBP32927 897 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 ZNF791Q3KP31 576 aaPredicted RBP12.36□□□□□ -0.43
HDAC7-221ENST00000477203 SPEM1Q8N4L4 309 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 DEFB123Q8N688 67 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 VMP1Q96GC9 406 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 TMEM80Q96HE8 168 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 CNDP2Q96KP4 475 aaKnown RBP12.36□□□□□ -0.43
HDAC7-221ENST00000477203 KLHDC3Q9BQ90 382 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 OR10A5Q9H207 317 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 FBXL4Q9UKA2 621 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 SPIN1Q9Y657 262 aaPredicted RBP12.36□□□□□ -0.43
HDAC7-221ENST00000477203 RTTNQ86VV8 2226 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 SYT5O00445 386 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 KHNYNO15037 678 aaKnown RBP12.36□□□□□ -0.43
HDAC7-221ENST00000477203 SLC22A1O15245 554 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 KIAA0513O60268 411 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 GDF9O60383 454 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 CLUP10909 449 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 POU3F3P20264 500 aaPredicted RBP12.36□□□□□ -0.43
HDAC7-221ENST00000477203 S1PR1P21453 382 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 ACVR2AP27037 513 aa12.36□□□□□ -0.43
HDAC7-221ENST00000477203 AFF3P51826 1226 aaKnown RBP12.36□□□□□ -0.43
HDAC7-221ENST00000477203 CSNK2BP67870 215 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms