RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 UTS2O95399 124 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 CNOT4O95628 575 aaKnown RBP6.5□□□□□ -1.37
BRCA1-214ENST00000477152 ANGPTL1O95841 491 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 NGFRP08138 427 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 KRT16P08779 473 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 ABHD2P08910 425 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 CTAGE8P0CG41 777 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 MYL2P10916 166 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 PAX1P15863 534 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 TSPAN8P19075 237 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 GABRA3P34903 492 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 IDUAP35475 653 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 PTH2RP49190 550 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 PRIM2P49643 509 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 B3GALT5-AS1P59052 145 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 PSG6Q00889 435 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 SLC29A2Q14542 456 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 RNPS1Q15287 305 aaKnown RBP6.5□□□□□ -1.37
BRCA1-214ENST00000477152 CCDC153Q494R4 210 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 UNC50Q53HI1 259 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 ZNF474Q6S9Z5 364 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-214ENST00000477152 TMEM107Q6UX40 140 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 NPSR1Q6W5P4 371 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 SH2D5Q6ZV89 423 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 Q71RC1 249 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-214ENST00000477152 R3HCC1LQ7Z5L2 792 aaKnown RBP6.5□□□□□ -1.37
BRCA1-214ENST00000477152 CTAGE4Q8IX94 777 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 OR2L13Q8N349 312 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 NATD1Q8N6N6 113 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 CCNYL1Q8N7R7 359 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 ZNF611Q8N823 705 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 FNDC9Q8TBE3 224 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 FIG4Q92562 907 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 ELP4Q96EB1 424 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 ARSGQ96EG1 525 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 ZBED6CLQ96FA7 236 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-214ENST00000477152 APIPQ96GX9 242 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 HBEGFQ99075 208 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 EBPLQ9BY08 206 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 HOXD1Q9GZZ0 328 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 ESRP2Q9H6T0 727 aaKnown RBP6.5□□□□□ -1.37
BRCA1-214ENST00000477152 PPCSQ9HAB8 311 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 ABCA2Q9BZC7 2435 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 AKAP9Q99996 3911 aa6.5□□□□□ -1.37
BRCA1-214ENST00000477152 SS18L1O75177 396 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 GLRA3O75311 464 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 SNUPNO95149 360 aaKnown RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 C8BP07358 591 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 ALOX5P09917 674 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 PF4V1P10720 104 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 NEFHP12036 1026 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 ATP6V1C1P21283 382 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 PCSK6P29122 969 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 ASMTP46597 345 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 CCT5P48643 541 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 ATP5J2P56134 94 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 RPS4XP62701 263 aaKnown RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 RAE1P78406 368 aaKnown RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 SRSF3P84103 164 aaKnown RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 DUSP2Q05923 314 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 TRADDQ15628 312 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 CPTPQ5TA50 214 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 FAM180BQ6P0A1 224 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 ZNF704Q6ZNC4 412 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 MTERF4Q7Z6M4 381 aaKnown RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 MARCH3Q86UD3 253 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 IFT20Q8IY31 132 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 JADE3Q92613 823 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 CPNE4Q96A23 557 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 ZNF764Q96H86 408 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 TMEM237Q96Q45 408 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 BARX1Q9HBU1 254 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 UBQLN4Q9NRR5 601 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 FAIMQ9NVQ4 179 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 PSMC3IPQ9P2W1 217 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 MTORP42345 2549 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 KIF2AO00139 706 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 UPK1AO00322 258 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 HS3ST1O14792 307 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 SEC22BO75396 215 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 CGAP01215 116 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 UROSP10746 265 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 ENPP1P22413 925 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 IL32P24001 234 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 SUCLG1P53597 346 aaKnown RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 CARD18P57730 90 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 TRIM25Q14258 630 aaKnown RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 HBMQ6B0K9 141 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 FAM71E1Q6IPT2 247 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 NOXRED1Q6NXP6 359 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 LRIG3Q6UXM1 1119 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 ZNF550Q7Z398 422 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 SZRD1Q7Z422 152 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 TRABD2AQ86V40 505 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 LYSMD2Q8IV50 215 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 SLC43A2Q8N370 569 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 GTPBP8Q8N3Z3 284 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-214ENST00000477152 CCDC63Q8NA47 563 aa6.49□□□□□ -1.37
BRCA1-214ENST00000477152 OR4N2Q8NGD1 307 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms