RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 OR5K3A6NET4 321 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 SLC22A31A6NKX4 558 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 HCN1O60741 890 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 CSF2P04141 144 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 CT62P0C5K7 136 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 CD53P19397 219 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 RACK1P63244 317 aaKnown RBP15.21■□□□□ 0.03
TMEM53-208ENST00000476724 COL9A2Q14055 689 aaPredicted RBP15.21■□□□□ 0.03
TMEM53-208ENST00000476724 KCNJ8Q15842 424 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 CARTPTQ16568 116 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 ZNF791Q3KP31 576 aaPredicted RBP15.21■□□□□ 0.03
TMEM53-208ENST00000476724 TSSK4Q6SA08 328 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 PRR23CQ6ZRP0 262 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 MARCH9Q86YJ5 346 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 VWA5B2Q8N398 1253 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 SIRT6Q8N6T7 355 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 SYT14Q8NB59 555 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 OR51G2Q8NGK0 314 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 PFN4Q8NHR9 129 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 NEIL3Q8TAT5 605 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 FAM174AQ8TBP5 190 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 LMF2Q9BU23 707 aaKnown RBP15.21■□□□□ 0.03
TMEM53-208ENST00000476724 TMED9Q9BVK6 235 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 KCNN2Q9H2S1 579 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 SEMA6CQ9H3T2 930 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 C20orf141Q9NUB4 165 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 BABAM2Q9NXR7 383 aa15.21■□□□□ 0.03
TMEM53-208ENST00000476724 MUC3AQ02505 3323 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 FAM183AA6NL82 134 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 CHP2O43745 196 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 AZGP1P25311 298 aaKnown RBP15.2■□□□□ 0.02
TMEM53-208ENST00000476724 RBM34P42696 430 aaKnown RBP15.2■□□□□ 0.02
TMEM53-208ENST00000476724 HTR3AP46098 478 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 CAPZA2P47755 286 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 RFX2P48378 723 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 PPP1CAP62136 330 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 SKP1P63208 163 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 FOXK2Q01167 660 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 ZNHIT3Q15649 155 aaPredicted RBP15.2■□□□□ 0.02
TMEM53-208ENST00000476724 SPATC1Q76KD6 591 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 KLBQ86Z14 1044 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 C1orf216Q8TAB5 229 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 SLC35B4Q969S0 331 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 OTULINQ96BN8 352 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 HDHD5Q9BXW7 423 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 ATP13A2Q9NQ11 1180 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 SIGLEC7Q9Y286 467 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 THADAQ6YHU6 1953 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 NPIPA5A0A0B4J1W7 369 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 A0A0B4J2E0 115 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 A0A1B0GX12 115 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 GXYLT2A0PJZ3 443 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 BLACEA4D250 179 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 C12orf71A8MTZ7 269 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 PRR23D1E9PI22 279 aaPredicted RBP15.2■□□□□ 0.02
TMEM53-208ENST00000476724 NPIPA7E9PJI5 369 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 SGK494L7N484 410 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 SSX4O60224 188 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 OR10H2O60403 315 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 PTP4A3O75365 173 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 CCNKO75909 580 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 CBX7O95931 251 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 CSF3P09919 207 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 NPIPA8P0DM63 369 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 PRR23D2P0DMB1 279 aaPredicted RBP15.2■□□□□ 0.02
TMEM53-208ENST00000476724 NME1P15531 152 aaKnown RBP15.2■□□□□ 0.02
TMEM53-208ENST00000476724 RPS5P46782 204 aaKnown RBP15.2■□□□□ 0.02
TMEM53-208ENST00000476724 MAZP56270 477 aaKnown RBP15.2■□□□□ 0.02
TMEM53-208ENST00000476724 HHEXQ03014 270 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 GALEQ14376 348 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 ZNF517Q6ZMY9 492 aaPredicted RBP15.2■□□□□ 0.02
TMEM53-208ENST00000476724 SCAIQ8N9R8 606 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 OR52R1Q8NGF1 315 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 DOK4Q8TEW6 326 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 NACC2Q96BF6 587 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 SPACA7Q96KW9 195 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 IFT27Q9BW83 186 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 TRIM2Q9C040 744 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 PCED1AQ9H1Q7 454 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 ADAM30Q9UKF2 790 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 POMT2Q9UKY4 750 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 SLC35A3Q9Y2D2 325 aa15.2■□□□□ 0.02
TMEM53-208ENST00000476724 LRRTM2O43300 516 aa15.19■□□□□ 0.02
TMEM53-208ENST00000476724 SAGP10523 405 aaPredicted RBP15.19■□□□□ 0.02
TMEM53-208ENST00000476724 TRAM1Q15629 374 aa15.19■□□□□ 0.02
TMEM53-208ENST00000476724 PYDC2Q56P42 97 aa15.19■□□□□ 0.02
TMEM53-208ENST00000476724 ZNF438Q7Z4V0 828 aa15.19■□□□□ 0.02
TMEM53-208ENST00000476724 GPALPP1Q8IXQ4 340 aa15.19■□□□□ 0.02
TMEM53-208ENST00000476724 OR4C6Q8NH72 309 aa15.19■□□□□ 0.02
TMEM53-208ENST00000476724 LMX1AQ8TE12 382 aa15.19■□□□□ 0.02
TMEM53-208ENST00000476724 ACOT12Q8WYK0 555 aa15.19■□□□□ 0.02
TMEM53-208ENST00000476724 SOSTQ9BQB4 213 aa15.19■□□□□ 0.02
TMEM53-208ENST00000476724 ALG8Q9BVK2 526 aa15.19■□□□□ 0.02
TMEM53-208ENST00000476724 HOXD1Q9GZZ0 328 aa15.19■□□□□ 0.02
TMEM53-208ENST00000476724 TRIM36Q9NQ86 728 aa15.19■□□□□ 0.02
TMEM53-208ENST00000476724 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.19■□□□□ 0.02
TMEM53-208ENST00000476724 DAPL1A0PJW8 107 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 RIIAD1A6NNX1 92 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 RNF13O43567 381 aa15.18■□□□□ 0.02
TMEM53-208ENST00000476724 RGS9O75916 674 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms