RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 C19orf24Q9BVV8 132 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 DEFB126Q9BYW3 111 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 CRNKL1Q9BZJ0 848 aaKnown RBP4.41□□□□□ -1.7
VPS50-212ENST00000476413 CLEC4AQ9UMR7 237 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 POLDIP2Q9Y2S7 368 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 AK6Q9Y3D8 172 aaKnown RBP4.41□□□□□ -1.7
VPS50-212ENST00000476413 PPIAL4AQ9Y536 164 aa4.41□□□□□ -1.7
VPS50-212ENST00000476413 B4DXG7 233 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 RS1O15537 224 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 SRSF10O75494 262 aaKnown RBP4.4□□□□□ -1.71
VPS50-212ENST00000476413 SURF6O75683 361 aaKnown RBP4.4□□□□□ -1.71
VPS50-212ENST00000476413 PNMTP11086 282 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 DHPSP49366 369 aaPredicted RBP4.4□□□□□ -1.71
VPS50-212ENST00000476413 EFNA3P52797 238 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 GANABQ14697 944 aaKnown RBP4.4□□□□□ -1.71
VPS50-212ENST00000476413 GSG1Q2KHT4 349 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 SLC25A30Q5SVS4 291 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 DHRSXQ8N5I4 330 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 EIF1ADQ8N9N8 165 aaKnown RBP4.4□□□□□ -1.71
VPS50-212ENST00000476413 OR2A12Q8NGT7 310 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 SHC3Q92529 594 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 ZNF670Q9BS34 389 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 NIPSNAP3BQ9BS92 247 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 LRRN3Q9H3W5 708 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 ERVW-1Q9UQF0 538 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 PDE10AQ9Y233 779 aa4.4□□□□□ -1.71
VPS50-212ENST00000476413 IGLV8-61A0A075B6I0 122 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 TRAV26-1A0A087WT03 109 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 A0A1B0GWB2 263 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 PHOX2AO14813 284 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 LRATO95237 230 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 PGK1P00558 417 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 IL1BP01584 269 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 STSP08842 583 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 ALOX5P09917 674 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 RPS14P62263 151 aaKnown RBP4.39□□□□□ -1.71
VPS50-212ENST00000476413 MESDQ14696 234 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 EXOC3L2Q2M3D2 409 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 LIPNQ5VXI9 398 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 OR5M10Q6IEU7 315 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 PMF1Q6P1K2 205 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 VITQ6UXI7 678 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 Q6ZR54 194 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 NLRP9Q7RTR0 991 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 TPRA1Q86W33 373 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 CLEC4FQ8N1N0 589 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 OR4D9Q8NGE8 314 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 OR5D13Q8NGL4 314 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 OR8J1Q8NGP2 316 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 PAQR8Q8TEZ7 354 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 NPAS2Q99743 824 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 TMEM43Q9BTV4 400 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 SPATA16Q9BXB7 569 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 GON7Q9BXV9 100 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 CHIAQ9BZP6 476 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 SLC7A10Q9NS82 523 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 OR1A1Q9P1Q5 309 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 TIMM10BQ9Y5J6 103 aa4.39□□□□□ -1.71
VPS50-212ENST00000476413 SYNJ2BP-COX16A0A087WUM0 186 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 IGKV3D-20A0A0C4DH25 116 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 FAM168BA1KXE4 195 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 VSTM2BA6NLU5 285 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 SULT2B1O00204 365 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 PRKYO43930 277 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 OPN1MWP04001 364 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 OPN1MW2P0DN77 364 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 OPN1MW3P0DN78 364 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 IGLL1P15814 213 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 ZP3P21754 424 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 NMT1P30419 496 aaKnown RBP4.38□□□□□ -1.71
VPS50-212ENST00000476413 GRIA1P42261 906 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 PRKXP51817 358 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 AIF1P55008 147 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 RIPK1Q13546 671 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 MARC1Q5VT66 337 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 ZSCAN25Q6NSZ9 544 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 FBXL22Q6P050 247 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 CCDC80Q76M96 950 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 ZNF677Q86XU0 584 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 KIR2DL4Q99706 377 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 CCT7Q99832 543 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 SLC35A5Q9BS91 424 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 RNF126Q9BV68 326 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 ZNF702PQ9H963 129 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 LRRC40Q9H9A6 602 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 C6orf203Q9P0P8 240 aaPredicted RBP4.38□□□□□ -1.71
VPS50-212ENST00000476413 APOBEC3BQ9UH17 382 aaKnown RBP4.38□□□□□ -1.71
VPS50-212ENST00000476413 MOKQ9UQ07 419 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 CA5BQ9Y2D0 317 aa4.38□□□□□ -1.71
VPS50-212ENST00000476413 ABCA7Q8IZY2 2146 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 ATP10AO60312 1499 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 MPHOSPH10O00566 681 aaKnown RBP4.37□□□□□ -1.71
VPS50-212ENST00000476413 TAGLN2P37802 199 aaKnown RBP4.37□□□□□ -1.71
VPS50-212ENST00000476413 KIR2DS2P43631 304 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 KRTAP10-12P60413 245 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 OR2B11Q5JQS5 317 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 TPGS2Q68CL5 300 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 SPINK14Q6IE38 97 aa4.37□□□□□ -1.71
VPS50-212ENST00000476413 Q6ZPB1 254 aaPredicted RBP4.37□□□□□ -1.71
VPS50-212ENST00000476413 UBQLNLQ8IYU4 475 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms