RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 VDAC3Q9Y277 283 aa13.05□□□□□ -0.32
CCNL1-217ENST00000476367 GTPBP1O00178 669 aaKnown RBP13.04□□□□□ -0.32
CCNL1-217ENST00000476367 AQP7O14520 342 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 ARPC2O15144 300 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 FRS3O43559 492 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 CYP7B1O75881 506 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 NUDT14O95848 222 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 CSTAP01040 98 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 UBTFL6P0CB48 400 aaPredicted RBP13.04□□□□□ -0.32
CCNL1-217ENST00000476367 PRKAR1BP31321 381 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 DSCR4P56555 118 aaPredicted RBP13.04□□□□□ -0.32
CCNL1-217ENST00000476367 C3AR1Q16581 482 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 DNAL1Q4LDG9 190 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 ZNF311Q5JNZ3 666 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 RAET1LQ5VY80 246 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 GLYATQ6IB77 296 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 MYO7BQ6PIF6 2116 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 DHRS4L2Q6PKH6 230 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 C3P1Q6ZMU1 363 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 CCDC121Q6ZUS5 278 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 TSEN54Q7Z6J9 526 aaKnown RBP13.04□□□□□ -0.32
CCNL1-217ENST00000476367 SLC30A8Q8IWU4 369 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 OR5M9Q8NGP3 310 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 B4GALNT2Q8NHY0 566 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 FIG4Q92562 907 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 C1GALT1C1Q96EU7 318 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 GORASP2Q9H8Y8 452 aa13.04□□□□□ -0.32
CCNL1-217ENST00000476367 DIDO1Q9BTC0 2240 aaKnown RBP13.04□□□□□ -0.32
CCNL1-217ENST00000476367 A0A1B0GVC2 190 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 AP3D1O14617 1153 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 PRRG2O14669 202 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 ZNF264O43296 627 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 LGI1O95970 557 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 GKN3PP0CG01 181 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 HK1P19367 917 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 TNFRSF1BP20333 461 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 ATP6V1B2P21281 511 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 CASP6P55212 293 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 HOXC5Q00444 222 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 KCNC4Q03721 635 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 TRIM25Q14258 630 aaKnown RBP13.03□□□□□ -0.32
CCNL1-217ENST00000476367 GANABQ14697 944 aaKnown RBP13.03□□□□□ -0.32
CCNL1-217ENST00000476367 NPTX1Q15818 432 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 LIN52Q52LA3 116 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 DCST1Q5T197 706 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 EIF3MQ7L2H7 374 aaKnown RBP13.03□□□□□ -0.32
CCNL1-217ENST00000476367 YTHDF3Q7Z739 585 aaKnown RBP13.03□□□□□ -0.32
CCNL1-217ENST00000476367 PATL1Q86TB9 770 aaKnown RBP13.03□□□□□ -0.32
CCNL1-217ENST00000476367 FJX1Q86VR8 437 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 ARMC8Q8IUR7 673 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 ULK2Q8IYT8 1036 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 OR5M1Q8NGP8 315 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 FAM57AQ8TBR7 257 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 GPR119Q8TDV5 335 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 SARAFQ96BY9 339 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 SFXN2Q96NB2 322 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 ZNF607Q96SK3 696 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 PRR14Q9BWN1 585 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 LAT2Q9GZY6 243 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.03□□□□□ -0.32
CCNL1-217ENST00000476367 SLC7A8Q9UHI5 535 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 ACAD8Q9UKU7 415 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 ZNF835Q9Y2P0 537 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 IFT52Q9Y366 437 aa13.03□□□□□ -0.32
CCNL1-217ENST00000476367 OR14I1A6ND48 311 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 SHISA8B8ZZ34 492 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 FESP07332 822 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 STSP08842 583 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 LINGO3P0C6S8 592 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 FUT4P22083 530 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 ME2P23368 584 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 GCKP35557 465 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 CA7P43166 264 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 ZNF41P51814 821 aaPredicted RBP13.02□□□□□ -0.32
CCNL1-217ENST00000476367 B3GALT5-AS1P59052 145 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 NRF1Q16656 503 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 TMEM44Q2T9K0 475 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 LRRC23Q53EV4 343 aaPredicted RBP13.02□□□□□ -0.32
CCNL1-217ENST00000476367 CYBRD1Q53TN4 286 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 INTS11Q5TA45 600 aaKnown RBP13.02□□□□□ -0.32
CCNL1-217ENST00000476367 Q6ZPB1 254 aaPredicted RBP13.02□□□□□ -0.32
CCNL1-217ENST00000476367 CBLL1Q75N03 491 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 VTCN1Q7Z7D3 282 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 KRT73Q86Y46 540 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 RBM45Q8IUH3 476 aaKnown RBP13.02□□□□□ -0.32
CCNL1-217ENST00000476367 CMIPQ8IY22 773 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 CCDC124Q96CT7 223 aaKnown RBP13.02□□□□□ -0.32
CCNL1-217ENST00000476367 PINK1Q9BXM7 581 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 HHATLQ9HCP6 504 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 EXOSC3Q9NQT5 275 aaKnown RBP13.02□□□□□ -0.32
CCNL1-217ENST00000476367 PNPLA3Q9NST1 481 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 DCAF13Q9NV06 445 aaKnown RBP13.02□□□□□ -0.32
CCNL1-217ENST00000476367 SLC35A3Q9Y2D2 325 aa13.02□□□□□ -0.32
CCNL1-217ENST00000476367 TCRBV5S2A0A599 114 aa13.02□□□□□ -0.33
CCNL1-217ENST00000476367 FAM47E-STBD1D6RA91 191 aa13.02□□□□□ -0.33
CCNL1-217ENST00000476367 ETV2O00321 342 aaPredicted RBP13.02□□□□□ -0.33
CCNL1-217ENST00000476367 BCKDKO14874 412 aa13.02□□□□□ -0.33
CCNL1-217ENST00000476367 LRRTM2O43300 516 aa13.02□□□□□ -0.33
CCNL1-217ENST00000476367 EFNA2O43921 213 aa13.02□□□□□ -0.33
CCNL1-217ENST00000476367 EIF4E2O60573 245 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms