RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ULK3Q6PHR2 472 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 FIGNL1Q6PIW4 674 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 C5orf46Q6UWT4 87 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 CD300LDQ6UXZ3 194 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 NPSR1Q6W5P4 371 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 VTCN1Q7Z7D3 282 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 LILRA2Q8N149 483 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 SLC43A2Q8N370 569 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 DHRSXQ8N5I4 330 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 CLEC1AQ8NC01 280 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 ZNF555Q8NEP9 628 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 OR11G2Q8NGC1 345 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 TMEM234Q8WY98 164 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 TMBIM1Q969X1 311 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 DHRS1Q96LJ7 313 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 ZNF597Q96LX8 424 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 PRRC1Q96M27 445 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 ALPK1Q96QP1 1244 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 GAL3ST4Q96RP7 486 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 YTHDF1Q9BYJ9 559 aaKnown RBP6.44□□□□□ -1.38
SHQ1-207ENST00000475558 TBL1XR1Q9BZK7 514 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 AMBRA1Q9C0C7 1298 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 GABARAPL1Q9H0R8 117 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 NXF5Q9H1B4 397 aaKnown RBP6.44□□□□□ -1.38
SHQ1-207ENST00000475558 COQ10BQ9H8M1 238 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 ANKRA2Q9H9E1 313 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 AKIRIN1Q9H9L7 192 aaPredicted RBP6.44□□□□□ -1.38
SHQ1-207ENST00000475558 NTN4Q9HB63 628 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 ACER3Q9NUN7 267 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 RPS6KB2Q9UBS0 482 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 TESQ9UGI8 421 aaKnown RBP6.44□□□□□ -1.38
SHQ1-207ENST00000475558 HS3ST3B1Q9Y662 390 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 HSPE1-MOB4S4R3N1 261 aa6.44□□□□□ -1.38
SHQ1-207ENST00000475558 DOPEY1Q5JWR5 2465 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 GXYLT2A0PJZ3 443 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 FIGNL2A6NMB9 653 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 TMEM229AB2RXF0 380 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 FAM47E-STBD1D6RA91 191 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 M0R3G1 203 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 HRKO00198 91 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 SOCS6O14544 535 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 CNOT3O75175 753 aaKnown RBP6.43□□□□□ -1.38
SHQ1-207ENST00000475558 SEC24DO94855 1032 aaPredicted RBP6.43□□□□□ -1.38
SHQ1-207ENST00000475558 CCNB2O95067 398 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 UTS2O95399 124 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 OPN1SWP03999 348 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 PDGFAP04085 211 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 FBXO45P0C2W1 286 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 LINGO3P0C6S8 592 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 COX6A1P12074 109 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 OR1E2P47887 323 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 SSR4P51571 173 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 CRYBA2P53672 197 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 ESRRGP62508 458 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 VLDLRP98155 873 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 SPIBQ01892 262 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 INPP5JQ15735 1006 aaPredicted RBP6.43□□□□□ -1.38
SHQ1-207ENST00000475558 ANKDD1AQ495B1 522 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 IQCCQ4KMZ1 466 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 RPS26P11Q5JNZ5 115 aaPredicted RBP6.43□□□□□ -1.38
SHQ1-207ENST00000475558 WBP2NLQ6ICG8 309 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 SHISA6Q6ZSJ9 500 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 LANCL3Q6ZV70 420 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 VRK2Q86Y07 508 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 C9orf40Q8IXQ3 194 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 OFCC1Q8IZS5 231 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 CBR4Q8N4T8 237 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 TMEM156Q8N614 296 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 ATG16L2Q8NAA4 619 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 GPR32P1Q8NGA4 272 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 OR4C3Q8NH37 302 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 ACOT11Q8WXI4 607 aaPredicted RBP6.43□□□□□ -1.38
SHQ1-207ENST00000475558 ZG16BQ96DA0 208 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 OMA1Q96E52 524 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 POM121Q96HA1 1249 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 LMF1Q96S06 567 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 ADOQ96SZ5 270 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 MCHR1Q99705 422 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 CIB1Q99828 191 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 SLC19A3Q9BZV2 496 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 NDEL1Q9GZM8 345 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 SEMA6AQ9H2E6 1030 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 PTGES2Q9H7Z7 377 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 P4HTMQ9NXG6 502 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 SMPD3Q9NY59 655 aaPredicted RBP6.43□□□□□ -1.38
SHQ1-207ENST00000475558 PDP1Q9P0J1 537 aaPredicted RBP6.43□□□□□ -1.38
SHQ1-207ENST00000475558 OAZ3Q9UMX2 235 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 TMEM5Q9Y2B1 443 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 LRCH1Q9Y2L9 728 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 PCDHGB7Q9Y5F8 929 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 PCDHGA9Q9Y5G4 932 aaKnown RBP6.43□□□□□ -1.38
SHQ1-207ENST00000475558 V9GYQ6 96 aa6.43□□□□□ -1.38
SHQ1-207ENST00000475558 PRRC2CQ9Y520 2896 aaKnown RBP6.43□□□□□ -1.38
SHQ1-207ENST00000475558 TNRC6AQ8NDV7 1962 aaKnown RBP6.42□□□□□ -1.38
SHQ1-207ENST00000475558 ABCA12Q86UK0 2595 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 CELSR2Q9HCU4 2923 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 A0A087WZY1 265 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 WIPF3A6NGB9 483 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 LINC01387J3KSC0 135 aa6.42□□□□□ -1.38
SHQ1-207ENST00000475558 hCG_2039718K7EN88 272 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms