RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ZAR1LA6NP61 321 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 TM4SF5O14894 197 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 HCRTR2O43614 444 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 ZNF354AO60765 605 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-210ENST00000475329 OR6B1O95007 311 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 SOX14O95416 240 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 ANGPTL1O95841 491 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 CELA2AP08217 269 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 FBXO45P0C2W1 286 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 ICAM2P13598 275 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 CHMP24386 653 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 FPR3P25089 353 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 GSSP48637 474 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 ISL1P61371 349 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 LSM11P83369 360 aaKnown RBP eCLIP12.57□□□□□ -0.41e-7■■■□□ 18.3
TRAF4-210ENST00000475329 ZNF117Q03924 483 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 CD47Q08722 323 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 RBM48Q5RL73 367 aaKnown RBP12.57□□□□□ -0.4
TRAF4-210ENST00000475329 WBP2NLQ6ICG8 309 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 LYPD8Q6UX82 237 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 WDR88Q6ZMY6 472 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 Q6ZPB1 254 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-210ENST00000475329 DEPDC4Q8N2C3 294 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 OR5M3Q8NGP4 307 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 FAM81AQ8TBF8 368 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 FBLIM1Q8WUP2 373 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 HDAC2Q92769 488 aaKnown RBP12.57□□□□□ -0.4
TRAF4-210ENST00000475329 SH3YL1Q96HL8 342 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-210ENST00000475329 RASL10BQ96S79 203 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 CCNL2Q96S94 520 aaPredicted RBP12.57□□□□□ -0.4
TRAF4-210ENST00000475329 CNIH4Q9P003 139 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 MED31Q9Y3C7 131 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 KNTC1P50748 2209 aa12.57□□□□□ -0.4
TRAF4-210ENST00000475329 EML6Q6ZMW3 1958 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 PCNX3Q9H6A9 2034 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 LOC101059948A0A1B0GTJ6 334 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-210ENST00000475329 H3BN98 237 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 SMIM18P0DKX4 95 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 POU1F1P28069 291 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 ELK4P28324 431 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 GPR4P46093 362 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 IDH2P48735 452 aaKnown RBP12.56□□□□□ -0.4
TRAF4-210ENST00000475329 CDC42P60953 191 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 PRKCDQ05655 676 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 TOP3AQ13472 1001 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-210ENST00000475329 MAD2L1BPQ15013 274 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-210ENST00000475329 PTGES3Q15185 160 aaKnown RBP12.56□□□□□ -0.4
TRAF4-210ENST00000475329 NTRK2Q16620 822 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 MEP1AQ16819 746 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 CTU2Q2VPK5 515 aaKnown RBP12.56□□□□□ -0.4
TRAF4-210ENST00000475329 CBLN3Q6UW01 205 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 RASSF6Q6ZTQ3 369 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 MRGPREQ86SM8 312 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 MEX3DQ86XN8 651 aaKnown RBP12.56□□□□□ -0.4
TRAF4-210ENST00000475329 CDK20Q8IZL9 346 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 RNF138Q8WVD3 245 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 ADAMTS14Q8WXS8 1223 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 SPACA9Q96E40 222 aaPredicted RBP12.56□□□□□ -0.4
TRAF4-210ENST00000475329 NODALQ96S42 347 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 ZNF426Q9BUY5 554 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 MRPS26Q9BYN8 205 aaKnown RBP12.56□□□□□ -0.4
TRAF4-210ENST00000475329 RTN4RQ9BZR6 473 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 BATF3Q9NR55 127 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 IMPAD1Q9NX62 359 aa12.56□□□□□ -0.4
TRAF4-210ENST00000475329 YARS2Q9Y2Z4 477 aaKnown RBP12.56□□□□□ -0.4
TRAF4-210ENST00000475329 CDRT15L2A8MXV6 281 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 KPNA4O00629 521 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-210ENST00000475329 SLC30A4O14863 429 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 KLF4O43474 513 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 ITGA10O75578 1167 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 TP53P04637 393 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-210ENST00000475329 PNMTP11086 282 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 IFI30P13284 250 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 PGCP20142 388 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 PTNP21246 168 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 SDHBP21912 280 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 F8A1P23610 371 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 P2RX1P51575 399 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 CTBP2P56545 445 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 IL10RAQ13651 578 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 CBFBQ13951 182 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 C6orf141Q5SZD1 244 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 BROXQ5VW32 411 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 SLX4IPQ5VYV7 408 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 OPN5Q6U736 354 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 IGF2-ASQ6U949 168 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 MARCH9Q86YJ5 346 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 CCDC71Q8IV32 467 aaPredicted RBP12.55□□□□□ -0.4
TRAF4-210ENST00000475329 DND1Q8IYX4 353 aaKnown RBP12.55□□□□□ -0.4
TRAF4-210ENST00000475329 IL22RA1Q8N6P7 574 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 OR5W2Q8NH69 310 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 PFN4Q8NHR9 129 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 B4GALNT2Q8NHY0 566 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 ZNF563Q8TA94 476 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 TEX47Q8TBZ9 253 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 NKD1Q969G9 470 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 C3orf49Q96BT1 292 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 GPA33Q99795 319 aa12.55□□□□□ -0.4
TRAF4-210ENST00000475329 ADNPQ9H2P0 1102 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms