RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 PABPC4LP0CB38 370 aaKnown RBP13.9□□□□□ -0.18
SRRT-209ENST00000474896 ACP2P11117 423 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 SHC1P29353 583 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 SFTPDP35247 375 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 CDKN1AP38936 164 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 RPL38P63173 70 aaKnown RBP13.9□□□□□ -0.18
SRRT-209ENST00000474896 KIAA0040Q15053 153 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 ATP6AP1LQ52LC2 224 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 RFTN2Q52LD8 501 aaPredicted RBP13.9□□□□□ -0.18
SRRT-209ENST00000474896 C6orf136Q5SQH8 315 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 SFRP5Q5T4F7 317 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 SZRD1Q7Z422 152 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 TUSC5Q8IXB3 177 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 LRRC34Q8IZ02 419 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 GABRG1Q8N1C3 465 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 ZNF619Q8N2I2 560 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 B4GALNT2Q8NHY0 566 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 ABHD3Q8WU67 409 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 HSD17B8Q92506 261 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 FBXW5Q969U6 566 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 GIMAP5Q96F15 307 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 C16orf58Q96GQ5 468 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 FCRL1Q96LA6 429 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 KLHL15Q96M94 604 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 ESRP2Q9H6T0 727 aaKnown RBP13.9□□□□□ -0.18
SRRT-209ENST00000474896 WDR55Q9H6Y2 383 aaPredicted RBP13.9□□□□□ -0.18
SRRT-209ENST00000474896 AKTIPQ9H8T0 292 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 NGBQ9NPG2 151 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 TIGARQ9NQ88 270 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 UBQLN4Q9NRR5 601 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 NTMQ9P121 344 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 LIPT1Q9Y234 373 aa13.9□□□□□ -0.18
SRRT-209ENST00000474896 GOLGA8QA0A0J9YX86 632 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 GOLGA8OA6NCC3 632 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 GOLGA8NF8WBI6 632 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 SCDO00767 359 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 AKAP10O43572 662 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 EFNA2O43921 213 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 TGDSO95455 350 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 ADAP00813 363 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 LINGO3P0C6S8 592 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 IL32P24001 234 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 EPHA3P29320 983 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 ACVR1BP36896 505 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 RNPS1Q15287 305 aaKnown RBP13.89□□□□□ -0.19
SRRT-209ENST00000474896 TAB1Q15750 504 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 CD226Q15762 336 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 ETFDHQ16134 617 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 ZNF239Q16600 458 aaKnown RBP13.89□□□□□ -0.19
SRRT-209ENST00000474896 DUSP5Q16690 384 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 SLC9B1Q4ZJI4 515 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 ZNF385BQ569K4 471 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 CCNJQ5T5M9 372 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 TFAP2EQ6VUC0 442 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 MISPQ8IVT2 679 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 ZFP28Q8NHY6 868 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 OTUB1Q96FW1 271 aaPredicted RBP13.89□□□□□ -0.19
SRRT-209ENST00000474896 MAELQ96JY0 434 aaKnown RBP13.89□□□□□ -0.19
SRRT-209ENST00000474896 ZNF317Q96PQ6 595 aaPredicted RBP13.89□□□□□ -0.19
SRRT-209ENST00000474896 SRXN1Q9BYN0 137 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 YAE1D1Q9NRH1 226 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 SH3BP4Q9P0V3 963 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 TMED5Q9Y3A6 229 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 MAGED1Q9Y5V3 778 aaPredicted RBP13.89□□□□□ -0.19
SRRT-209ENST00000474896 SNX8Q9Y5X2 465 aa13.89□□□□□ -0.19
SRRT-209ENST00000474896 RNF212BA8MTL3 300 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 PRKD3O94806 890 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 ALOX5P09917 674 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 ADH6P28332 368 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 LCN1P31025 176 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 LSP1P33241 339 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 EIF1P41567 113 aaKnown RBP13.88□□□□□ -0.19
SRRT-209ENST00000474896 PRIM2P49643 509 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 AQP5P55064 265 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 GNGT1P63211 74 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 FAPQ12884 760 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 TMEM176BQ3YBM2 270 aaPredicted RBP13.88□□□□□ -0.19
SRRT-209ENST00000474896 ZNF672Q499Z4 452 aaPredicted RBP13.88□□□□□ -0.19
SRRT-209ENST00000474896 EPGNQ6UW88 154 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 ATG4DQ86TL0 474 aaPredicted RBP13.88□□□□□ -0.19
SRRT-209ENST00000474896 COX18Q8N8Q8 333 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 FNDC5Q8NAU1 212 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 RNF128Q8TEB7 428 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 CPNE4Q96A23 557 aaPredicted RBP13.88□□□□□ -0.19
SRRT-209ENST00000474896 PPCDCQ96CD2 204 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 ZBED6CLQ96FA7 236 aaPredicted RBP13.88□□□□□ -0.19
SRRT-209ENST00000474896 THOC1Q96FV9 657 aaKnown RBP13.88□□□□□ -0.19
SRRT-209ENST00000474896 CHMP6Q96FZ7 201 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 MS4A4EQ96PG1 132 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 SLCO5A1Q9H2Y9 848 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 REEP4Q9H6H4 257 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 NPHS2Q9NP85 383 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 BAIAP2L1Q9UHR4 511 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 CADP27708 2225 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 CR1P17927 2039 aa13.88□□□□□ -0.19
SRRT-209ENST00000474896 A0A1W2PP18 115 aa13.87□□□□□ -0.19
SRRT-209ENST00000474896 A0A1W2PQD3 144 aa13.87□□□□□ -0.19
SRRT-209ENST00000474896 DPRXA6NFQ7 191 aa13.87□□□□□ -0.19
SRRT-209ENST00000474896 ADAM11O75078 769 aa13.87□□□□□ -0.19
SRRT-209ENST00000474896 NDUFS7O75251 213 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms