RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 TMCO5AQ8N6Q1 288 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 MINDY2Q8NBR6 621 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 OR9Q1Q8NGQ5 310 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 OR13C2Q8NGS9 318 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 KISS1RQ969F8 398 aaPredicted RBP9.03□□□□□ -0.96
USP39-214ENST00000474572 ZNF501Q96CX3 271 aaPredicted RBP9.03□□□□□ -0.96
USP39-214ENST00000474572 SENP5Q96HI0 755 aaPredicted RBP9.03□□□□□ -0.96
USP39-214ENST00000474572 PTCHD1Q96NR3 888 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 GUCD1Q96NT3 240 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 ELF4Q99607 663 aaPredicted RBP9.03□□□□□ -0.96
USP39-214ENST00000474572 MROQ9BYG7 248 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 HOXD1Q9GZZ0 328 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 ENKD1Q9H0I2 346 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 IRAK4Q9NWZ3 460 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 SERTAD3Q9UJW9 196 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 CARD8Q9Y2G2 431 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 SIT1Q9Y3P8 196 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 SPAG17Q6Q759 2223 aa9.03□□□□□ -0.96
USP39-214ENST00000474572 SPTBN5Q9NRC6 3674 aaKnown RBP9.02□□□□□ -0.97
USP39-214ENST00000474572 FER1L5A0AVI2 2057 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 A0A087WUJ7 227 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 FAM86C2PA6NEL3 165 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 CCDC182A6NF36 153 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 SOCS6O14544 535 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 TO15178 435 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 CBFA2T3O75081 653 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 CSTAP01040 98 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 IL1AP01583 271 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 IFNA16P05015 189 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 DCNP07585 359 aaKnown RBP9.02□□□□□ -0.97
USP39-214ENST00000474572 ANKRD34CP0C6C1 535 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 FOLR1P15328 257 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 GALP22466 123 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 SLC2A5P22732 501 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 EPHA8P29322 1005 aaPredicted RBP9.02□□□□□ -0.97
USP39-214ENST00000474572 FGF9P31371 208 aaPredicted RBP9.02□□□□□ -0.97
USP39-214ENST00000474572 SLC6A6P31641 620 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 GABRA5P31644 462 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 SOX6P35712 828 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 OR1D4P47884 311 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 SLC9A3P48764 834 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 RGS19P49795 217 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 RNF144AP50876 292 aaPredicted RBP9.02□□□□□ -0.97
USP39-214ENST00000474572 PGDP52209 483 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 DCAF7P61962 342 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 FOXK2Q01167 660 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 IFITM3Q01628 133 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 ZNF45Q02386 682 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 OXA1LQ15070 435 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 RGS21Q2M5E4 152 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 ALG10BQ5I7T1 473 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 OR2G6Q5TZ20 316 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 PRPF38BQ5VTL8 546 aaKnown RBP9.02□□□□□ -0.97
USP39-214ENST00000474572 TTLL10Q6ZVT0 673 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 MEPCEQ7L2J0 689 aaKnown RBP9.02□□□□□ -0.97
USP39-214ENST00000474572 WDR5BQ86VZ2 330 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 CPOQ8IVL8 374 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 CENPSQ8N2Z9 138 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 ZNF614Q8N883 585 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 GALNT6Q8NCL4 622 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 BBS1Q8NFJ9 593 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 OR4C3Q8NH37 302 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 GRHL3Q8TE85 626 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 ZNF721Q8TF20 911 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.02□□□□□ -0.97
USP39-214ENST00000474572 DNAJA4Q8WW22 397 aaPredicted RBP9.02□□□□□ -0.97
USP39-214ENST00000474572 TSLPQ969D9 159 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 ADIPOR1Q96A54 375 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 COX4I2Q96KJ9 171 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 WDFY2Q96P53 400 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 MED18Q9BUE0 208 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 ASPNQ9BXN1 380 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 SLC19A3Q9BZV2 496 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 CAPN10Q9HC96 672 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 MCCC2Q9HCC0 563 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 ZNF304Q9HCX3 659 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 TXNL4BQ9NX01 149 aaKnown RBP9.02□□□□□ -0.97
USP39-214ENST00000474572 CHCHD3Q9NX63 227 aaKnown RBP9.02□□□□□ -0.97
USP39-214ENST00000474572 ERVK13-1Q9NX77 482 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 ETAA1Q9NY74 926 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 HAO2Q9NYQ3 351 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 KLHL3Q9UH77 587 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 SSR3Q9UNL2 185 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 CAB39Q9Y376 341 aaPredicted RBP9.02□□□□□ -0.97
USP39-214ENST00000474572 PEX16Q9Y5Y5 336 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 MAU2Q9Y6X3 613 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 ABCA7Q8IZY2 2146 aa9.02□□□□□ -0.97
USP39-214ENST00000474572 TNRC18O15417 2968 aaPredicted RBP9.02□□□□□ -0.97
USP39-214ENST00000474572 IGLV3-12A0A075B6K2 115 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 LY6G6EA0A0G2JKS1 128 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 A0A1B0GTQ1 180 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 IQCMA0A1B0GVH7 501 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 A0A1B0GX78 115 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 SLC35F4A4IF30 521 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 SAGE2PA6NJ88 616 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 SLC22A31A6NKX4 558 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 WWP2O00308 870 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 KPNA4O00629 521 aaPredicted RBP9.01□□□□□ -0.97
USP39-214ENST00000474572 PPM1BO75688 479 aa9.01□□□□□ -0.97
USP39-214ENST00000474572 LALBAP00709 142 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms