RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 KIAA0319LQ8IZA0 1049 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 PGBD5Q8N414 524 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 OR5R1Q8NH85 324 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 NEK7Q8TDX7 302 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 WFIKKN2Q8TEU8 576 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 ACOT12Q8WYK0 555 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 LMF1Q96S06 567 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 HSD17B14Q9BPX1 270 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 IFT27Q9BW83 186 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 TEX101Q9BY14 249 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 CPVLQ9H3G5 476 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 GSTO2Q9H4Y5 243 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 PTGES2Q9H7Z7 377 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 TUBA4BQ9H853 241 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 LHX9Q9NQ69 397 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 CALML5Q9NZT1 146 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 CFAP97Q9P2B7 532 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 FBXL3Q9UKT7 428 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 LOXHD1Q8IVV2 1947 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 ARID2Q68CP9 1835 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 OR2M5A3KFT3 312 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM227AF5H4B4 570 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 FOXE1O00358 373 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 PIP5K1BO14986 540 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 CHST10O43529 356 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 RDH16O75452 317 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 CD3GP09693 182 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 DAOP14920 347 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 MGMTP16455 207 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 ADCYAP1P18509 176 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 EPHA2P29317 976 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 THBS4P35443 961 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 SERPINF1P36955 418 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 MNDAP41218 407 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 WNT5AP41221 380 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 ZFP36L2P47974 494 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC26A5P58743 744 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 GMFBP60983 142 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 OSTNP61366 133 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 LSM6P62312 80 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 MXD1Q05195 221 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 TCP10Q12799 353 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 HTR4Q13639 388 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 C1DQ13901 141 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 PTGR1Q14914 329 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 RTP5Q14D33 572 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 RSU1Q15404 277 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 SPHARQ15513 63 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 TECRLQ5HYJ1 363 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 DCAF10Q5QP82 559 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 CLEC6AQ6EIG7 209 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 OR52W1Q6IF63 320 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 TMEM270Q6UE05 265 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 TMEM91Q6ZNR0 172 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 MRPL52Q86TS9 123 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 KCNMB4Q86W47 210 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 CBWD2Q8IUF1 395 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 GLB1L2Q8IW92 636 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 CFAP206Q8IYR0 622 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 BCL6BQ8N143 479 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 SYNE4Q8N205 404 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 STPG3Q8N7X2 389 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 UBAC2Q8NBM4 344 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 FBXO15Q8NCQ5 510 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 B3GNT7Q8NFL0 401 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 OR2G2Q8NGZ5 317 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 TWIST2Q8WVJ9 160 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 ASB13Q8WXK3 278 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 RRNAD1Q96FB5 475 aaKnown RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 SPATA13Q96N96 652 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 THAP7Q9BT49 309 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 LRFN3Q9BTN0 628 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 EPHX3Q9H6B9 360 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC25A19Q9HC21 320 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 PIPOXQ9P0Z9 390 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 NFKBIL1Q9UBC1 381 aaPredicted RBP4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 COMMD3Q9UBI1 195 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 RPS6KB2Q9UBS0 482 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 MOKQ9UQ07 419 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 SLC35A3Q9Y2D2 325 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 GSTK1Q9Y2Q3 226 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 DNAJC15Q9Y5T4 150 aa4.77□□□□□ -1.65
TMEM39A-206ENST00000473684 ZCWPW2A0A1B0GU75 182 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 A0A1B0GUH1 482 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 A8MWP6 167 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 AZIN1O14977 448 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 SURF4O15260 269 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 RPP14O95059 124 aaKnown RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 NXPH2O95156 264 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 THP07101 528 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 PRR35P0CG20 571 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 RPA2P15927 270 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 GKP32189 559 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 AHRP35869 848 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 MTPNP58546 118 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 TLE2Q04725 743 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 MGAT2Q10469 447 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 GAMTQ14353 236 aa4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 SURF2Q15527 256 aaPredicted RBP4.76□□□□□ -1.65
TMEM39A-206ENST00000473684 FAM187BQ17R55 369 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms