RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 SKP2Q13309 424 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 SMU1Q2TAY7 513 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 ARHGAP11BQ3KRB8 267 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 ZNF527Q8NB42 609 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 OR5W2Q8NH69 310 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 DNAJA3Q96EY1 480 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 THUMPD3Q9BV44 507 aaKnown RBP14.86□□□□□ -0.03
USP40-212ENST00000473191 ZNF350Q9GZX5 532 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 STOML1Q9UBI4 398 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 ACTL7BQ9Y614 415 aa14.86□□□□□ -0.03
USP40-212ENST00000473191 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 CLDN24A6NM45 220 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 SDHDO14521 159 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 ADAM11O75078 769 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 H6PDO95479 791 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 KRT16P08779 473 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 UBTFL6P0CB48 400 aaPredicted RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 ELK4P28324 431 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 ADH6P28332 368 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 EIF1P41567 113 aaKnown RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 CDKN2CP42773 168 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 SUMO3P55854 103 aaPredicted RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 NKX6-1P78426 367 aaPredicted RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 FGFBP1Q14512 234 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 CASP8Q14790 479 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 ZNF141Q15928 474 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 TYW3Q6IPR3 259 aaKnown RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 HEPHL1Q6MZM0 1159 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 Q71RC1 249 aaPredicted RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 ATG4DQ86TL0 474 aaPredicted RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 ZFP90Q8TF47 636 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 XAGE5Q8WWM1 108 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 ZNF775Q96BV0 537 aaPredicted RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 NMUR2Q9GZQ4 415 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 WDR55Q9H6Y2 383 aaPredicted RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 MEAF6Q9HAF1 191 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 PAQR5Q9NXK6 330 aaPredicted RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 EDARQ9UNE0 448 aa14.85□□□□□ -0.03
USP40-212ENST00000473191 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 GPC6Q9Y625 555 aaPredicted RBP14.85□□□□□ -0.03
USP40-212ENST00000473191 PRR14LQ5THK1 2151 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 UQCRHLA0A096LP55 91 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 H3BNH8 94 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 STX11O75558 287 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 GCM2O75603 506 aaPredicted RBP14.84□□□□□ -0.03
USP40-212ENST00000473191 HOXB4P17483 251 aaPredicted RBP14.84□□□□□ -0.03
USP40-212ENST00000473191 LBPP18428 481 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 ACKR1Q16570 336 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 FAM174BQ3ZCQ3 159 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 TIGD2Q4W5G0 525 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 SLC25A53Q5H9E4 307 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 SAXO2Q658L1 398 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 ALKBH2Q6NS38 261 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 TFAP2EQ6VUC0 442 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 FCRLAQ7L513 359 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 CIARTQ8N365 385 aaPredicted RBP14.84□□□□□ -0.03
USP40-212ENST00000473191 MGARPQ8TDB4 240 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 TESCQ96BS2 214 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 POM121Q96HA1 1249 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 MRGPRX4Q96LA9 322 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 INPP5KQ9BT40 448 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 ACTR6Q9GZN1 396 aa14.84□□□□□ -0.03
USP40-212ENST00000473191 BEX4Q9NWD9 120 aaPredicted RBP14.84□□□□□ -0.03
USP40-212ENST00000473191 MARCOQ9UEW3 520 aaPredicted RBP14.84□□□□□ -0.03
USP40-212ENST00000473191 MAP1AP78559 2803 aaPredicted RBP14.84□□□□□ -0.03
USP40-212ENST00000473191 C2CD3Q4AC94 2353 aa14.83□□□□□ -0.03
USP40-212ENST00000473191 NF1P21359 2839 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 GOLGA8QA0A0J9YX86 632 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 PRSS51A0A1B0GVH4 220 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 GOLGA8OA6NCC3 632 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 GOLGA8NF8WBI6 632 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 ETV2O00321 342 aaPredicted RBP14.83□□□□□ -0.04
USP40-212ENST00000473191 DNAJA2O60884 412 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 UQCRC2P22695 453 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 PGM1P36871 562 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 SESN3P58005 492 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 CBFBQ13951 182 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 PDSS1Q5T2R2 415 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 BHLHB9Q6PI77 547 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 FRRS1Q6ZNA5 592 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 C16orf62Q7Z3J2 963 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 WFDC8Q8IUA0 241 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 GABRG1Q8N1C3 465 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 TOR1AIP2Q8NFQ8 470 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 MIPOL1Q8TD10 442 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 CPNE4Q96A23 557 aaPredicted RBP14.83□□□□□ -0.04
USP40-212ENST00000473191 ZNF300Q96RE9 604 aaPredicted RBP14.83□□□□□ -0.04
USP40-212ENST00000473191 LAT2Q9GZY6 243 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 HHATLQ9HCP6 504 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 GLRX2Q9NS18 164 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 KLHL13Q9P2N7 655 aa14.83□□□□□ -0.04
USP40-212ENST00000473191 TMEM120BA0PK00 339 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 DUXAA6NLW8 204 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 ZNF814B7Z6K7 855 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 E9PBE3 544 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 SMAD9O15198 467 aaKnown RBP14.82□□□□□ -0.04
USP40-212ENST00000473191 KIAA0513O60268 411 aa14.82□□□□□ -0.04
USP40-212ENST00000473191 EIF4E2O60573 245 aaKnown RBP14.82□□□□□ -0.04
USP40-212ENST00000473191 CSTAP01040 98 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms