RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 FOXO1Q12778 655 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 QPRTQ15274 297 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 NRF1Q16656 503 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 GLYR1Q49A26 553 aaPredicted RBP15.33■□□□□ 0.04
CCM2-205ENST00000472223 WBP2NLQ6ICG8 309 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 ENPP6Q6UWR7 440 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 DEF8Q6ZN54 512 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 PLEKHM3Q6ZWE6 761 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 GPR119Q8TDV5 335 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 ST8SIA1Q92185 356 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 UTP4Q969X6 686 aaKnown RBP15.33■□□□□ 0.04
CCM2-205ENST00000472223 NTNG2Q96CW9 530 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 PIGQQ9BRB3 760 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 POLR2J2Q9GZM3 115 aaKnown RBP15.33■□□□□ 0.04
CCM2-205ENST00000472223 POLR2J3Q9H1A7 115 aaKnown RBP15.33■□□□□ 0.04
CCM2-205ENST00000472223 SERINC1Q9NRX5 453 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 LUZP4Q9P127 313 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 VDAC3Q9Y277 283 aa15.33■□□□□ 0.04
CCM2-205ENST00000472223 LRRC3CA6NJW4 275 aa15.32■□□□□ 0.04
CCM2-205ENST00000472223 OIP5O43482 229 aa15.32■□□□□ 0.04
CCM2-205ENST00000472223 GLSO94925 669 aaPredicted RBP15.32■□□□□ 0.04
CCM2-205ENST00000472223 RAP2AP10114 183 aa15.32■□□□□ 0.04
CCM2-205ENST00000472223 TAS2R41P59536 307 aa15.32■□□□□ 0.04
CCM2-205ENST00000472223 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.32■□□□□ 0.04
CCM2-205ENST00000472223 TMEM251Q8N6I4 163 aa15.32■□□□□ 0.04
CCM2-205ENST00000472223 OR6T1Q8NGN1 323 aa15.32■□□□□ 0.04
CCM2-205ENST00000472223 DNAJA4Q8WW22 397 aaPredicted RBP15.32■□□□□ 0.04
CCM2-205ENST00000472223 STMN2Q93045 179 aa15.32■□□□□ 0.04
CCM2-205ENST00000472223 ZNF347Q96SE7 839 aa15.32■□□□□ 0.04
CCM2-205ENST00000472223 ZNF703Q9H7S9 590 aaPredicted RBP15.32■□□□□ 0.04
CCM2-205ENST00000472223 MED17Q9NVC6 651 aa15.32■□□□□ 0.04
CCM2-205ENST00000472223 CHST2Q9Y4C5 530 aa15.32■□□□□ 0.04
CCM2-205ENST00000472223 ZZEF1O43149 2961 aa15.32■□□□□ 0.04
CCM2-205ENST00000472223 CACNA1GO43497 2377 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 TCRBV5S2A0A599 114 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 TTLL8A6PVC2 850 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 H0YHG0 523 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 LINC01387J3KSC0 135 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 ATXN7O15265 892 aaPredicted RBP15.31■□□□□ 0.04
CCM2-205ENST00000472223 HPNP05981 417 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 TNFRSF1BP20333 461 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 ADH6P28332 368 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 SLC1A3P43003 542 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 MAGEA5P43359 124 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 ACTR3P61158 418 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 PMP22Q01453 160 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 KPNB1Q14974 876 aaKnown RBP15.31■□□□□ 0.04
CCM2-205ENST00000472223 RAET1LQ5VY80 246 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 AAGABQ6PD74 315 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 ULK3Q6PHR2 472 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 GRINAQ7Z429 371 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 ZDHHC21Q8IVQ6 265 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 MRGPRX4Q96LA9 322 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 FNDC11Q9BVV2 318 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 DEFB127Q9H1M4 99 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 ACER3Q9NUN7 267 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 RPH3AQ9Y2J0 694 aaPredicted RBP15.31■□□□□ 0.04
CCM2-205ENST00000472223 SPIN1Q9Y657 262 aaPredicted RBP15.31■□□□□ 0.04
CCM2-205ENST00000472223 PIEZO2Q9H5I5 2752 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 CACNA1BQ00975 2339 aa15.31■□□□□ 0.04
CCM2-205ENST00000472223 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 TCRBV3S1A0A5B6 114 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 CPSF4LA6NMK7 179 aaKnown RBP15.3■□□□□ 0.04
CCM2-205ENST00000472223 C17orf51A8MQB3 221 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 ANKRD65E5RJM6 399 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 ADAM10O14672 748 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 BCAS1O75363 584 aaPredicted RBP15.3■□□□□ 0.04
CCM2-205ENST00000472223 EPPINO95925 133 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 RFPL3SP0C7P2 107 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 PRG2P13727 222 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 TCEA1P23193 301 aaKnown RBP15.3■□□□□ 0.04
CCM2-205ENST00000472223 CXCR1P25024 350 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 FKBP2P26885 142 aaKnown RBP15.3■□□□□ 0.04
CCM2-205ENST00000472223 APOBEC1P41238 236 aaKnown RBP15.3■□□□□ 0.04
CCM2-205ENST00000472223 ACAA2P42765 397 aaKnown RBP15.3■□□□□ 0.04
CCM2-205ENST00000472223 POLR2HP52434 150 aaKnown RBP15.3■□□□□ 0.04
CCM2-205ENST00000472223 SESN3P58005 492 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 SMIM11AP58511 58 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 HOXC5Q00444 222 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 MERTKQ12866 999 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 NFATC3Q12968 1075 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 OR1Q1Q15612 314 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 PLPPR5Q32ZL2 321 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 KRTCAP3Q53RY4 240 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 ENTPD8Q5MY95 495 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 ZNF613Q6PF04 617 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 ARSKQ6UWY0 536 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 YRDCQ86U90 279 aaKnown RBP15.3■□□□□ 0.04
CCM2-205ENST00000472223 CISD2Q8N5K1 135 aaKnown RBP15.3■□□□□ 0.04
CCM2-205ENST00000472223 LSMEM1Q8N8F7 131 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 FAM83FQ8NEG4 500 aaPredicted RBP15.3■□□□□ 0.04
CCM2-205ENST00000472223 CANT1Q8WVQ1 401 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 SFXN2Q96NB2 322 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 AMBRA1Q9C0C7 1298 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 OR2B2Q9GZK3 357 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 UBQLN3Q9H347 655 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 ACKR4Q9NPB9 350 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 IL1RAPQ9NPH3 570 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 ENPP4Q9Y6X5 453 aa15.3■□□□□ 0.04
CCM2-205ENST00000472223 USP24Q9UPU5 2620 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms