RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 LHX2P50458 406 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 SELPLGQ14242 412 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 NDUFAF6Q330K2 333 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 SLC25A53Q5H9E4 307 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 RABL3Q5HYI8 236 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 ZNF311Q5JNZ3 666 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 MRPL2Q5T653 305 aaKnown RBP13.67□□□□□ -0.22
SNX13-205ENST00000471744 C1orf185Q5T7R7 199 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 RPTNQ6XPR3 784 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 B3GNT6Q6ZMB0 384 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 PTOV1Q86YD1 416 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 ULK2Q8IYT8 1036 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 MEIOBQ8N635 442 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 ZPLD1Q8TCW7 415 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 WDYHV1Q96HA8 205 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 EVA1AQ9H8M9 152 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 DNAJB12Q9NXW2 375 aaKnown RBP13.67□□□□□ -0.22
SNX13-205ENST00000471744 TNFRSF10DQ9UBN6 386 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 CAMK2AQ9UQM7 478 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 DOCK7Q96N67 2140 aa13.67□□□□□ -0.22
SNX13-205ENST00000471744 SPTAN1Q13813 2472 aaKnown RBP13.67□□□□□ -0.22
SNX13-205ENST00000471744 CACNA1CQ13936 2221 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 CDHR4A6H8M9 788 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 H0Y3Z8 333 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 ETV2O00321 342 aaPredicted RBP13.66□□□□□ -0.22
SNX13-205ENST00000471744 FAAHO00519 579 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 TCEA1P23193 301 aaKnown RBP13.66□□□□□ -0.22
SNX13-205ENST00000471744 PRKAR1BP31321 381 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 NUDT2P50583 147 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 RNF144AP50876 292 aaPredicted RBP13.66□□□□□ -0.22
SNX13-205ENST00000471744 MNAT1P51948 309 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 SMSP52788 366 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 RAC1P63000 192 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 EEF1A1P68104 462 aaKnown RBP13.66□□□□□ -0.22
SNX13-205ENST00000471744 QPRTQ15274 297 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 VMACQ2NL98 169 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 DCST1Q5T197 706 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 ZNF836Q6ZNA1 936 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 ZNF550Q7Z398 422 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 PATL1Q86TB9 770 aaKnown RBP13.66□□□□□ -0.22
SNX13-205ENST00000471744 CALHM3Q86XJ0 350 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 VRK2Q86Y07 508 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 ZZZ3Q8IYH5 903 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 SSC4DQ8WTU2 575 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 REXO5Q96IC2 774 aaKnown RBP13.66□□□□□ -0.22
SNX13-205ENST00000471744 RNF145Q96MT1 663 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 DMRTA2Q96SC8 542 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 GPATCH1Q9BRR8 931 aaKnown RBP13.66□□□□□ -0.22
SNX13-205ENST00000471744 TRIM8Q9BZR9 551 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 ALKBH4Q9NXW9 302 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 TAGLN3Q9UI15 199 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 ZNF337Q9Y3M9 751 aa13.66□□□□□ -0.22
SNX13-205ENST00000471744 INTS1Q8N201 2190 aaKnown RBP13.66□□□□□ -0.22
SNX13-205ENST00000471744 CFAP73A6NFT4 308 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 CLDN24A6NM45 220 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 GJE1A6NN92 205 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 FAM220BPB1ANY3 271 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 H3BML4 177 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 LDLRP01130 860 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 PRKCAP17252 672 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 HTR3AP46098 478 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 GZMMP51124 257 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 DLX5P56178 289 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 CLDN18P56856 261 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 PCBP3P57721 371 aaKnown RBP13.65□□□□□ -0.22
SNX13-205ENST00000471744 RPS3AP61247 264 aaKnown RBP13.65□□□□□ -0.22
SNX13-205ENST00000471744 SRSF1Q07955 248 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNX13-205ENST00000471744 FOXF1Q12946 379 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 VEZF1Q14119 521 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 KRT72Q14CN4 511 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 ACSF3Q4G176 576 aaPredicted RBP13.65□□□□□ -0.22
SNX13-205ENST00000471744 DHRS4L2Q6PKH6 230 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 CHMP1BQ7LBR1 199 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 HMGN2P46Q86SG4 172 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 MED12LQ86YW9 2145 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 LACC1Q8IV20 430 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 ZNF563Q8TA94 476 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 BCAS4Q8TDM0 211 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 CNOT9Q92600 299 aaKnown RBP13.65□□□□□ -0.22
SNX13-205ENST00000471744 CCDC120Q96HB5 630 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 CALHM2Q9HA72 323 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 ACER3Q9NUN7 267 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 PAQR5Q9NXK6 330 aaPredicted RBP13.65□□□□□ -0.22
SNX13-205ENST00000471744 NDE1Q9NXR1 346 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 MPDZO75970 2070 aa13.65□□□□□ -0.22
SNX13-205ENST00000471744 ICE1Q9Y2F5 2266 aa13.64□□□□□ -0.23
SNX13-205ENST00000471744 WIPF3A6NGB9 483 aa13.64□□□□□ -0.23
SNX13-205ENST00000471744 CD8B2A6NJW9 211 aa13.64□□□□□ -0.23
SNX13-205ENST00000471744 NTN1O95631 604 aa13.64□□□□□ -0.23
SNX13-205ENST00000471744 EPPINO95925 133 aa13.64□□□□□ -0.23
SNX13-205ENST00000471744 GP1BBP13224 206 aa13.64□□□□□ -0.23
SNX13-205ENST00000471744 AGAP20933 346 aa13.64□□□□□ -0.23
SNX13-205ENST00000471744 PSMA4P25789 261 aaKnown RBP13.64□□□□□ -0.23
SNX13-205ENST00000471744 FKBP2P26885 142 aaKnown RBP13.64□□□□□ -0.23
SNX13-205ENST00000471744 STARP49675 285 aa13.64□□□□□ -0.23
SNX13-205ENST00000471744 SESN3P58005 492 aa13.64□□□□□ -0.23
SNX13-205ENST00000471744 COPZ1P61923 177 aa13.64□□□□□ -0.23
SNX13-205ENST00000471744 SRYQ05066 204 aa13.64□□□□□ -0.23
SNX13-205ENST00000471744 EPS8Q12929 822 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms