RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 RPA2P15927 270 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 SERPINF1P36955 418 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 GMPRP36959 345 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 OR1D4P47884 311 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 TMEM139Q8IV31 216 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 OR10A5Q9H207 317 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 OR10A2Q9H208 303 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 NKX1-2Q9UD57 310 aaPredicted RBP12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 BCAS2O75934 225 aaPredicted RBP12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CER1O95813 267 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 SCGB1C2P0DMR2 95 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 GTPBP8Q8N3Z3 284 aaPredicted RBP12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 MTMR14Q8NCE2 650 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 SFXN5Q8TD22 340 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 RNF32Q9H0A6 362 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CALHM2Q9HA72 323 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 HSFX1Q9UBD0 423 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 ZNF840PA6NDX5 716 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 SOCS6O14544 535 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CAPNS1P04632 268 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 TP53I3Q53FA7 332 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 EMC10Q5UCC4 262 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 ZNF585AQ6P3V2 769 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 IL34Q6ZMJ4 242 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 WDR31Q8NA23 367 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 APMAPQ9HDC9 416 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 SACM1LQ9NTJ5 587 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 PPP2CBP62714 309 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CRMP1Q14194 572 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 MOB1BQ7L9L4 216 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 ZNF440Q8IYI8 595 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 PSMF1Q92530 271 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 ZFYVE21Q9BQ24 234 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 SMOXQ9NWM0 555 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 GPR83Q9NYM4 423 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 F8W036 122 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 KCNE1P15382 129 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 BMPR1AP36894 532 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 BLOC1S1P78537 153 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 TMEM150AQ86TG1 271 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 IGDCC3Q8IVU1 814 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 NR4A3Q92570 626 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 FCRL3Q96P31 734 aaPredicted RBP12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CTRCQ99895 268 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 RPS10P5Q9NQ39 176 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 SPTBN2O15020 2390 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 C1orf196B1AJZ1 125 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 PVRP15151 417 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 MAP2K3P46734 347 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 RPS5P46782 204 aaKnown RBP12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 PITX1P78337 314 aaPredicted RBP12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 KCTD20Q7Z5Y7 419 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 TCEAL4Q96EI5 215 aa12.47□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 UBL4AP11441 157 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 UQCRFS1P47985 274 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 EPHA5P54756 1037 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 ZP2Q05996 745 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 GPR50Q13585 617 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 MBTPS1Q14703 1052 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 TMEM19Q96HH6 336 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 MGLLQ99685 303 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 ACTRT3Q9BYD9 372 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 ARMC1Q9NVT9 282 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 POLHQ9Y253 713 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 ARPC5O15511 151 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 BPIP17213 487 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 MAKP20794 623 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 RPL26P61254 145 aaKnown RBP12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 GLO1Q04760 184 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 ZNF468Q5VIY5 522 aaPredicted RBP12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 ZNF382Q96SR6 550 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 ADAM19Q9H013 955 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 C12orf49Q9H741 205 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 SALL3Q9BXA9 1300 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 YIF1AO95070 293 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 BIDP55957 195 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 OR1M1Q8NGA1 313 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 OR4N2Q8NGD1 307 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 IER3IP1Q9Y5U9 82 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 A0A1W2PPH5 198 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CT45A6P0DMU7 189 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CT45A5P0DMU8 189 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CT45A7P0DMV0 189 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CT45A8P0DMV1 189 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CT45A9P0DMV2 189 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 SOX9P48436 509 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 POU4F2Q12837 409 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CT45A2Q5DJT8 189 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CT45A1Q5HYN5 189 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CCNJQ5T5M9 372 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CT45A3Q8NHU0 189 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 CMTM3Q96MX0 182 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 MFFQ9GZY8 342 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 SLC23A2Q9UGH3 650 aa12.46□□□□□ -0.41
NPHP3-ACAD11-201ENST00000471702 KIF26BQ2KJY2 2108 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 DLG5Q8TDM6 1919 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 A0A096LPI6 279 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 SFT2D3Q587I9 215 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 VWA5B2Q8N398 1253 aa12.46□□□□□ -0.42
NPHP3-ACAD11-201ENST00000471702 GIMAP1Q8WWP7 306 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms