RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 C16orf58Q96GQ5 468 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 CLPTM1LQ96KA5 538 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 YIPF4Q9BSR8 244 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 C1orf50Q9BV19 199 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 PINK1Q9BXM7 581 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 ACTRT3Q9BYD9 372 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 ELOVL5Q9NYP7 299 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 GIMAP2Q9UG22 337 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 FAF1Q9UNN5 650 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-211ENST00000471260 SNX8Q9Y5X2 465 aa12.15□□□□□ -0.46
HMGN1-211ENST00000471260 SH3D21A4FU49 640 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 DPPA5A6NC42 116 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 H0YJX3 145 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 CASKO14936 926 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 SEC14L5O43304 696 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 CD8BP10966 210 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 DNASE1P24855 282 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 EIF1P41567 113 aaKnown RBP12.14□□□□□ -0.47
HMGN1-211ENST00000471260 KIR2DL2P43627 348 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-211ENST00000471260 NUDT2P50583 147 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 ZNF41P51814 821 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-211ENST00000471260 CLDN20P56880 219 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 RAC1P63000 192 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 TP53BP2Q13625 1128 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 PON3Q15166 354 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 SGCBQ16585 318 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 SPATS1Q496A3 300 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 PLXDC2Q6UX71 529 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 HACD2Q6Y1H2 254 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 PQLC1Q8N2U9 271 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 CNEP1R1Q8N9A8 125 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 OR5M1Q8NGP8 315 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 FBXO30Q8TB52 745 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 SLC26A7Q8TE54 656 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 ZFAND2BQ8WV99 257 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 SMPDL3BQ92485 455 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 FIG4Q92562 907 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 OR52B2Q96RD2 323 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 SLC39A3Q9BRY0 314 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 DUSP26Q9BV47 211 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 EFCAB1Q9HAE3 211 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 MEAF6Q9HAF1 191 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 GPATCH2Q9NW75 528 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 NDUFA13Q9P0J0 144 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 VDAC3Q9Y277 283 aa12.14□□□□□ -0.47
HMGN1-211ENST00000471260 ABCA4P78363 2273 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 MED13LQ71F56 2210 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 DUXAA6NLW8 204 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 BBIP1A8MTZ0 92 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 H0YC42 278 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 H3BNH8 94 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 ADAMDEC1O15204 470 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 BAG2O95816 211 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 C6orf47O95873 294 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 LYNP07948 512 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 G6PDP11413 515 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 UQCRBP14927 111 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 EFNA1P20827 205 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-211ENST00000471260 ME2P23368 584 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 PAX7P23759 505 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 ADH6P28332 368 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 TPD52P55327 224 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-211ENST00000471260 MED21Q13503 144 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 GUSBP1Q15486 140 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 PLPPR5Q32ZL2 321 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 SPDYE7PQ495Y7 208 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 PDSS1Q5T2R2 415 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 FAM214BQ7L5A3 538 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 GALNT10Q86SR1 603 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 GGNQ86UU5 652 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 SNX32Q86XE0 403 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 KRTCAP2Q8N6L1 136 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 CHDHQ8NE62 594 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-211ENST00000471260 B4GALNT2Q8NHY0 566 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 FNDC9Q8TBE3 224 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 NRGNQ92686 78 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 CDS1Q92903 461 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 MBD6Q96DN6 1003 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 ZNF845Q96IR2 970 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-211ENST00000471260 ALPK1Q96QP1 1244 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 CXorf36Q9H7Y0 433 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 GLRX2Q9NS18 164 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 CCM2LQ9NUG4 571 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-211ENST00000471260 MED17Q9NVC6 651 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 FBXO34Q9NWN3 711 aa12.13□□□□□ -0.47
HMGN1-211ENST00000471260 NUP214P35658 2090 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-211ENST00000471260 AKAP6Q13023 2319 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 RNASET2O00584 256 aaKnown RBP12.12□□□□□ -0.47
HMGN1-211ENST00000471260 EIF1AYO14602 144 aaKnown RBP12.12□□□□□ -0.47
HMGN1-211ENST00000471260 CFLARO15519 480 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 AK1P00568 194 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 CGAP01215 116 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 IL11P20809 199 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 PSMA4P25789 261 aaKnown RBP12.12□□□□□ -0.47
HMGN1-211ENST00000471260 CD79BP40259 229 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 ATP12AP54707 1039 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 SUMO3P55854 103 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-211ENST00000471260 HBA1P69905 142 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 KLHL26Q53HC5 615 aa12.12□□□□□ -0.47
HMGN1-211ENST00000471260 DCST2Q5T1A1 773 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms