RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 TMEM229AB2RXF0 380 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 H7C1Q1 480 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 M0QZ92 97 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 CACNB4O00305 520 aaPredicted RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 TNFRSF10BO14763 440 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 YY2O15391 372 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 F2P00734 622 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 PMP2P02689 132 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 EPHX1P07099 455 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 RHOP08100 348 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 SNRNP70P08621 437 aaKnown RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 EPXP11678 715 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 PTHLHP12272 177 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 C6P13671 934 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ABOP16442 354 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ITGA3P26006 1051 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 CERS1P27544 350 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 MSX1P28360 303 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 GABRR2P28476 465 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 PDHA2P29803 388 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ACVR1BP36896 505 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 MTNR1BP49286 362 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 SRSF3P84103 164 aaKnown RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 MEF2AQ02078 507 aaPredicted RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 PIN1Q13526 163 aaPredicted RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 DYRK1AQ13627 763 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 TOMM20Q15388 145 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 TRAM1Q15629 374 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 C2orf68Q2NKX9 166 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 NDUFAF6Q330K2 333 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 PLEKHN1Q494U1 663 aaPredicted RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 PDZD11Q5EBL8 140 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 TEX30Q5JUR7 227 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 CTSL3PQ5NE16 218 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 DCAF12L2Q5VW00 463 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 AFMIDQ63HM1 303 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 C12orf73Q69YU5 71 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 TCEAL6Q6IPX3 200 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 TAPT1Q6NXT6 567 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 CD200R1LQ6Q8B3 271 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 SLC36A4Q6YBV0 504 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ZNF783Q6ZMS7 281 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 MOB3CQ70IA8 216 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 KLHDC8BQ8IXV7 354 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 BEST3Q8N1M1 668 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 FAM26EQ8N5C1 309 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 CLDN19Q8N6F1 224 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 LRRC52Q8N7C0 313 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ARIH2OSQ8N7S6 290 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 POMGNT2Q8NAT1 580 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 FAM71CQ8NEG0 241 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 DMBX1Q8NFW5 382 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 OR5D16Q8NGK9 328 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 OR51Q1Q8NH59 317 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 OR52I2Q8NH67 350 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 LINC01599Q8WXQ3 324 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 MYLIPQ8WY64 445 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 MAFIPQ8WZ33 124 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 FATE1Q969F0 183 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 PNPLA2Q96AD5 504 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 CMTM7Q96FZ5 175 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 CMTM3Q96MX0 182 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 TEFMQ96QE5 360 aaKnown RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 MGME1Q9BQP7 344 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 TSPAN10Q9H1Z9 355 aaPredicted RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 HRH4Q9H3N8 390 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 CRTAC1Q9NQ79 661 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 CACNG4Q9UBN1 327 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 TESQ9UGI8 421 aaKnown RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 CBLCQ9ULV8 474 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ANGPT4Q9Y264 503 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ANK1P16157 1881 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 COLCA2A8K830 154 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 A8MVJ9 347 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 M0R036 132 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 AP4M1O00189 453 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 SYT5O00445 386 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 CLDN4O14493 209 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 RNF13O43567 381 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 PEX10O60683 326 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 REM1O75628 298 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 TXNDC12O95881 172 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ACTL6AO96019 429 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 GBAP04062 536 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 MMP2P08253 660 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 OR8U8P0C7N1 319 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 GKN3PP0CG01 181 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 IDSP22304 550 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 ELAVL4P26378 380 aaKnown RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 ADH6P28332 368 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 MPGP29372 298 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 CCND3P30281 292 aaPredicted RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 ACVRL1P37023 503 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 HMGCS2P54868 508 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 LIM2P55344 173 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 WNT3P56703 355 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 SMAD4Q13485 552 aaKnown RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 KLF9Q13886 244 aaPredicted RBP3.94□□□□□ -1.78
VPS50-210ENST00000471188 RSU1Q15404 277 aa3.94□□□□□ -1.78
VPS50-210ENST00000471188 RPS26P11Q5JNZ5 115 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms