RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 LINGO3P0C6S8 592 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 HK1P19367 917 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 CHMP24386 653 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 COL8A1P27658 744 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 GCKP35557 465 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 EIF1P41567 113 aaKnown RBP13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 CRYBA2P53672 197 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 B3GALT5-AS1P59052 145 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 MXRA7P84157 204 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 SLC25A3Q00325 362 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 HSF1Q00613 529 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 SLC25A53Q5H9E4 307 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 WIPI1Q5MNZ9 446 aaPredicted RBP13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 SAMD4BQ5PRF9 694 aaKnown RBP13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 VASNQ6EMK4 673 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 ARSKQ6UWY0 536 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 Q6ZPB1 254 aaPredicted RBP13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 YRDCQ86U90 279 aaKnown RBP13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 ARMC8Q8IUR7 673 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 ARHGAP24Q8N264 748 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 GTPBP8Q8N3Z3 284 aaPredicted RBP13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 TMCO5AQ8N6Q1 288 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 TNIP2Q8NFZ5 429 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 GPR119Q8TDV5 335 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 RASSF5Q8WWW0 418 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 ST8SIA1Q92185 356 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 CNOT9Q92600 299 aaKnown RBP13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 KLHDC3Q9BQ90 382 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 PIGQQ9BRB3 760 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 PIF1Q9H611 641 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 LDAHQ9H6V9 325 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 SPRR3Q9UBC9 169 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 ERRFI1Q9UJM3 462 aaPredicted RBP13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 USP22Q9UPT9 525 aa13.53□□□□□ -0.24
CDC42SE1-203ENST00000470278 HEATR5AQ86XA9 2040 aa13.52□□□□□ -0.24
CDC42SE1-203ENST00000470278 PCNX3Q9H6A9 2034 aa13.52□□□□□ -0.24
CDC42SE1-203ENST00000470278 FREM3P0C091 2139 aa13.52□□□□□ -0.24
CDC42SE1-203ENST00000470278 DNAJC13O75165 2243 aa13.52□□□□□ -0.24
CDC42SE1-203ENST00000470278 A1L4Q6 167 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 FAM47E-STBD1D6RA91 191 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 SYT5O00445 386 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 SLC19A2O60779 497 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 NTN1O95631 604 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 C8BP07358 591 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 HSD17B1P14061 328 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 UQCRBP14927 111 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 PRKCAP17252 672 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 PGCP20142 388 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 PSMA4P25789 261 aaKnown RBP13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 ELK4P28324 431 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 ADH6P28332 368 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 PTGS2P35354 604 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 CCR4P51679 360 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 CRYZQ08257 329 aaKnown RBP13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 ELOAQ14241 798 aaKnown RBP13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 EIF2S3LQ2VIR3 472 aaKnown RBP13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 ZNF787Q6DD87 383 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 AAGABQ6PD74 315 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 C6orf89Q6UWU4 347 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 DEFB107AQ8IZN7 70 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 CLIP4Q8N3C7 705 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 TAMM41Q96BW9 452 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 SARAFQ96BY9 339 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 MRGPRX4Q96LA9 322 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 SFXN2Q96NB2 322 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 KCTD14Q9BQ13 255 aaPredicted RBP13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 PINK1Q9BXM7 581 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 RSPO3Q9BXY4 272 aaPredicted RBP13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 RLIMQ9NVW2 624 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 ADA2Q9NZK5 511 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 VDAC3Q9Y277 283 aa13.52□□□□□ -0.25
CDC42SE1-203ENST00000470278 OR2M5A3KFT3 312 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 CFAP73A6NFT4 308 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 M0QX08 132 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 GMFGO60234 142 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 ADAM11O75078 769 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 NUDT14O95848 222 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 EPPINO95925 133 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 LDLRP01130 860 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 IFNA14P01570 189 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 HTR1EP28566 365 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 KDELR2P33947 212 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 DMTNQ08495 405 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 EPS8Q12929 822 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 BNIP1Q12981 228 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 QPRTQ15274 297 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 RAET1LQ5VY80 246 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 ZNF550Q7Z398 422 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 FAM57AQ8TBR7 257 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 TMEM234Q8WY98 164 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 UGT2B28Q9BY64 529 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 PRDM14Q9GZV8 571 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 EXO5Q9H790 373 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 TAS2R1Q9NYW7 299 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 CD300AQ9UGN4 299 aa13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 PRPF19Q9UMS4 504 aaKnown RBP13.51□□□□□ -0.25
CDC42SE1-203ENST00000470278 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 CYP7B1O75881 506 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 OPN1SWP03999 348 aa13.5□□□□□ -0.25
CDC42SE1-203ENST00000470278 STSP08842 583 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms