RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 MAGOHP61326 146 aaKnown RBP5.73□□□□□ -1.49
PTCD3-208ENST00000469585 MRPS22P82650 360 aaKnown RBP5.73□□□□□ -1.49
PTCD3-208ENST00000469585 FOLH1Q04609 750 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 PMPCAQ10713 525 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 RUNX2Q13950 521 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 PCLAFQ15004 111 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 PIK3CD-AS1Q5SR53 167 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 NDUFAF5Q5TEU4 345 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 AGBL2Q5U5Z8 902 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 FAM69BQ5VUD6 431 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 BHLHB9Q6PI77 547 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 OPN5Q6U736 354 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 LANCL3Q6ZV70 420 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 SZRD1Q7Z422 152 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 RPS19BP1Q86WX3 136 aaKnown RBP5.73□□□□□ -1.49
PTCD3-208ENST00000469585 ANKRD13BQ86YJ7 626 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 GPALPP1Q8IXQ4 340 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 ST13P4Q8IZP2 240 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-208ENST00000469585 LRRC25Q8N386 305 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-208ENST00000469585 METTL4Q8N3J2 472 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 C1orf52Q8N6N3 182 aaKnown RBP5.73□□□□□ -1.49
PTCD3-208ENST00000469585 NATD1Q8N6N6 113 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 PRSS3P2Q8NHM4 247 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 AGR3Q8TD06 166 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 MGARPQ8TDB4 240 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 LRRC8CQ8TDW0 803 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 AGAP11Q8TF27 550 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 RAB40AQ8WXH6 277 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 ST8SIA4Q92187 359 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 TUBGCP3Q96CW5 907 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 MSI2Q96DH6 328 aaKnown RBP5.73□□□□□ -1.49
PTCD3-208ENST00000469585 SMIM10Q96HG1 83 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 ZBTB18Q99592 522 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 MAPKAP1Q9BPZ7 522 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 AAMDCQ9H7C9 122 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 VIPAS39Q9H9C1 493 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 LRTM1Q9HBL6 345 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 HHATLQ9HCP6 504 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 HPF1Q9NWY4 346 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 C1orf109Q9NX04 203 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 ALKBH4Q9NXW9 302 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 MSRB1Q9NZV6 116 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 PRODH2Q9UF12 536 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 PCDHGB4Q9UN71 923 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 KLF13Q9Y2Y9 288 aaPredicted RBP5.73□□□□□ -1.49
PTCD3-208ENST00000469585 YARS2Q9Y2Z4 477 aaKnown RBP5.73□□□□□ -1.49
PTCD3-208ENST00000469585 TIMM22Q9Y584 194 aa5.73□□□□□ -1.49
PTCD3-208ENST00000469585 SPTBP11277 2137 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 AKAP13Q12802 2813 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 SEC16AO15027 2179 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 A0A0A6YYD5 115 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 IGHV3-20A0A0C4DH32 117 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 A0A1W2PQ72 361 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 TMEM120BA0PK00 339 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 OR5H15A6NDH6 313 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 GABRR3A8MPY1 467 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 ZNF814B7Z6K7 855 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 J3QKU1 62 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 TP53I11O14683 189 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 HS6ST1O60243 411 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 LDB3O75112 727 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 CEACAM4O75871 244 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 GBAP04062 536 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 P04436 131 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 CHRM4P08173 479 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 SLC35E2P0CK97 266 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 EPORP19235 508 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 TIA1P31483 386 aaKnown RBP eCLIP5.72□□□□□ -1.493e-7■■■□□ 17.1
PTCD3-208ENST00000469585 SLC1A6P48664 564 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 RPL14P50914 215 aaKnown RBP5.72□□□□□ -1.49
PTCD3-208ENST00000469585 XKP51811 444 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 PSMD4P55036 377 aaKnown RBP5.72□□□□□ -1.49
PTCD3-208ENST00000469585 ABCE1P61221 599 aaKnown RBP5.72□□□□□ -1.49
PTCD3-208ENST00000469585 STX1BP61266 288 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 BTG2P78543 158 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 SRSF1Q07955 248 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTCD3-208ENST00000469585 C2orf80Q0P641 193 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 LINC00303Q3SY05 128 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 VPS26BQ4G0F5 336 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 ENTPD8Q5MY95 495 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 ACER2Q5QJU3 275 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 BEND6Q5SZJ8 279 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-208ENST00000469585 AAGABQ6PD74 315 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 IGFL3Q6UXB1 125 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 RPS27LQ71UM5 84 aaKnown RBP5.72□□□□□ -1.49
PTCD3-208ENST00000469585 ZNF575Q86XF7 245 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 CRLF3Q8IUI8 442 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 BCORP1Q8N888 145 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 FNDC5Q8NAU1 212 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 OR7G1Q8NGA0 311 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 OR8K3Q8NH51 312 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 C16orf52Q8NHV5 167 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 TWIST2Q8WVJ9 160 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 FAR1Q8WVX9 515 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 CNOT9Q92600 299 aaKnown RBP5.72□□□□□ -1.49
PTCD3-208ENST00000469585 TSLPQ969D9 159 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 NCLNQ969V3 563 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 PPCDCQ96CD2 204 aa5.72□□□□□ -1.49
PTCD3-208ENST00000469585 ZBED6CLQ96FA7 236 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-208ENST00000469585 CHMP6Q96FZ7 201 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms