RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 GALNT1Q10472 559 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 EFR3AQ14156 821 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 KCNMB1Q16558 191 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 ZNF239Q16600 458 aaKnown RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 GRAMD1BQ3KR37 738 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 GLYR1Q49A26 553 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 SGO1Q5FBB7 561 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 CCNYL2Q5T2Q4 361 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 STEAP4Q687X5 459 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 RPS27LQ71UM5 84 aaKnown RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 LRRC70Q7Z2Q7 622 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 ISCA2Q86U28 154 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 EXOC3L1Q86VI1 746 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 TXLNBQ8N3L3 684 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 TCAIMQ8N3R3 496 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 ZNF433Q8N7K0 673 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 LINC01356Q8N9X3 169 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 WDR31Q8NA23 367 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 ZFAND2BQ8WV99 257 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 ZNF75CPQ92670 426 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 UBE2E3Q969T4 207 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 MAGOHBQ96A72 148 aaKnown RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 ATOH8Q96SQ7 321 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 VRK1Q99986 396 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 PIMREGQ9BSJ6 248 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 INPP5KQ9BT40 448 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 LRRC1Q9BTT6 524 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 COQ10BQ9H8M1 238 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 CNOT10Q9H9A5 744 aaKnown RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 LPAR2Q9HBW0 351 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 GLRX2Q9NS18 164 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 KLHL13Q9P2N7 655 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 OPTCQ9UBM4 332 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 PRODH2Q9UF12 536 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 MCTS1Q9ULC4 181 aaKnown RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 CORO1CQ9ULV4 474 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-209ENST00000469511 CFL2Q9Y281 166 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 TSC22D4Q9Y3Q8 395 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 SLC25A15Q9Y619 301 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 TEX264Q9Y6I9 313 aa4.6□□□□□ -1.67
PTPN4-209ENST00000469511 LOC105371242A0A075B767 164 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 IGLV3-32A0A0A0MS00 114 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 A0A0A6YYJ9 748 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 LOC390937A0A1W2PQ73 354 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 A0A1W2PRB8 838 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 C1orf226A1L170 272 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 SUPT3HB4E1H0 165 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 ATP6V1G2-DDX39BF2Z307 99 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 SLCO1B7G3V0H7 640 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 H0YIV9 168 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 PPP6CO00743 305 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 SCDO00767 359 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 OR7A17O14581 309 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 SUPT3HO75486 399 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 YES1P07947 543 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 TACSTD2P09758 323 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 CSF3P09919 207 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 DHRS4L1P0CG22 281 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 CHN1P15882 459 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 GGT1P19440 569 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 COX5AP20674 150 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 APEX1P27695 318 aaKnown RBP4.59□□□□□ -1.67
PTPN4-209ENST00000469511 SERPINB1P30740 379 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 APOBEC3AP31941 199 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-209ENST00000469511 KRT20P35900 424 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 OR3A2P47893 321 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 ARFIP1P53367 373 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 MANFP55145 182 aaKnown RBP4.59□□□□□ -1.67
PTPN4-209ENST00000469511 SESN3P58005 492 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 MGAT5Q09328 741 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 TRADDQ15628 312 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 TOMM34Q15785 309 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-209ENST00000469511 PLPPR5Q32ZL2 321 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 CDKL4Q5MAI5 379 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 TIMM23BQ5SRD1 257 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 CPTPQ5TA50 214 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 C6orf163Q5TEZ5 329 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 C9orf135Q5VTT2 229 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 LIPJQ5W064 366 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 CCDC137Q6PK04 289 aaKnown RBP4.59□□□□□ -1.67
PTPN4-209ENST00000469511 Q6ZT83 130 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 ESPNLQ6ZVH7 1005 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 FCRLAQ7L513 359 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 COMMD6Q7Z4G1 85 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 GOLGA7Q7Z5G4 137 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 CMC1Q7Z7K0 106 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 C1QL4Q86Z23 238 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 WDR75Q8IWA0 830 aaKnown RBP4.59□□□□□ -1.67
PTPN4-209ENST00000469511 METTL4Q8N3J2 472 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 GTPBP8Q8N3Z3 284 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-209ENST00000469511 RNF10Q8N5U6 811 aaKnown RBP4.59□□□□□ -1.67
PTPN4-209ENST00000469511 GBP7Q8N8V2 638 aaPredicted RBP4.59□□□□□ -1.67
PTPN4-209ENST00000469511 ATP6V1C2Q8NEY4 427 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 OR4C3Q8NH37 302 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 FAM110BQ8TC76 370 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 ZNF675Q8TD23 568 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 UBTD2Q8WUN7 234 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 KCTD4Q8WVF5 259 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 C22orf15Q8WYQ4 148 aa4.59□□□□□ -1.67
PTPN4-209ENST00000469511 PIK3R3Q92569 461 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms