RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 OR10H1Q9Y4A9 318 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 ERICH3Q5RHP9 1530 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 DISP1Q96F81 1524 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 MAST1Q9Y2H9 1570 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 SETXQ7Z333 2677 aaKnown RBP3.83□□□□□ -1.8
LSM5-209ENST00000468872 ZFHX4Q86UP3 3567 aa3.83□□□□□ -1.8
LSM5-209ENST00000468872 PIEZO1Q92508 2521 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 MROH2AA6NES4 1674 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 ZC3H13Q5T200 1668 aaKnown RBP3.82□□□□□ -1.8
LSM5-209ENST00000468872 RREB1Q92766 1687 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 ATP7AQ04656 1500 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 EHBP1L1Q8N3D4 1523 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 CCDC88BA6NC98 1476 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 K7EQM0 130 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 CDX4O14627 284 aaPredicted RBP3.82□□□□□ -1.8
LSM5-209ENST00000468872 THY1P04216 161 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 UGT2B4P06133 528 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 CHI3L1P36222 383 aaPredicted RBP3.82□□□□□ -1.8
LSM5-209ENST00000468872 XCR1P46094 333 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 FNTAP49354 379 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 VLDLRP98155 873 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 ST3GAL3Q11203 375 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 KCNJ11Q14654 390 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 TATDN3Q17R31 274 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 PPP1R42Q7Z4L9 355 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 SERPINA9Q86WD7 417 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 LRRC43Q8N309 656 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 ZNF607Q96SK3 696 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 CRACR2AQ9BSW2 395 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 ZSCAN5AQ9BUG6 496 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 DUSP16Q9BY84 665 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 POLR1EQ9GZS1 481 aaKnown RBP3.82□□□□□ -1.8
LSM5-209ENST00000468872 IKZF5Q9H5V7 419 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 ELOVL3Q9HB03 270 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 GNG12Q9UBI6 72 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 XPO7Q9UIA9 1087 aaKnown RBP3.82□□□□□ -1.8
LSM5-209ENST00000468872 NAALAD2Q9Y3Q0 740 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 HCFC1P51610 2035 aa3.82□□□□□ -1.8
LSM5-209ENST00000468872 KIF14Q15058 1648 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 IGKV6D-41A0A0C4DH26 115 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 OR6C65A6NJZ3 312 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 GPAA1O43292 621 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 GMFGO60234 142 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 SCRG1O75711 98 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 KIAA0754O94854 1291 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 FASP25445 335 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 HNMTP50135 292 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 SLC25A1P53007 311 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 SERTAD2Q14140 314 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 LAGE3Q14657 143 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 SLC5A12Q1EHB4 618 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 TIGITQ495A1 244 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 GLYR1Q49A26 553 aaPredicted RBP3.81□□□□□ -1.8
LSM5-209ENST00000468872 GGTA1PQ4G0N0 100 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 PAN3Q58A45 887 aaKnown RBP3.81□□□□□ -1.8
LSM5-209ENST00000468872 ATAD3BQ5T9A4 648 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 C2orf66Q6UXQ4 117 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 TBC1D21Q8IYX1 336 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 TRUB1Q8WWH5 349 aaKnown RBP3.81□□□□□ -1.8
LSM5-209ENST00000468872 CTNNBL1Q8WYA6 563 aaPredicted RBP3.81□□□□□ -1.8
LSM5-209ENST00000468872 OR5M11Q96RB7 305 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 SLC6A7Q99884 636 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 DPH7Q9BTV6 452 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 TSSK1BQ9BXA7 367 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 GLT8D2Q9H1C3 349 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 DPM3Q9P2X0 92 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 ZNF107Q9UII5 783 aaPredicted RBP3.81□□□□□ -1.8
LSM5-209ENST00000468872 MRPS33Q9Y291 106 aaKnown RBP3.81□□□□□ -1.8
LSM5-209ENST00000468872 ITSN2Q9NZM3 1697 aa3.81□□□□□ -1.8
LSM5-209ENST00000468872 TOP2AP11388 1531 aaKnown RBP3.8□□□□□ -1.8
LSM5-209ENST00000468872 SCAPERQ9BY12 1400 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 MBLAC1A4D2B0 266 aaPredicted RBP3.8□□□□□ -1.8
LSM5-209ENST00000468872 E9PLD3 99 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 NUDT21O43809 227 aaKnown RBP3.8□□□□□ -1.8
LSM5-209ENST00000468872 SPAG6O75602 509 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 ADCY5O95622 1261 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 CA1P00915 261 aaPredicted RBP3.8□□□□□ -1.8
LSM5-209ENST00000468872 GIG44P09565 113 aaPredicted RBP3.8□□□□□ -1.8
LSM5-209ENST00000468872 PGCP20142 388 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 GDF1P27539 372 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 NF2P35240 595 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 HPCAL1P37235 193 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 MDH2P40926 338 aaKnown RBP3.8□□□□□ -1.8
LSM5-209ENST00000468872 PPT1P50897 306 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 CBX1P83916 185 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 ASAH1Q13510 395 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 SYPL1Q16563 259 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 CCDC152Q4G0S7 254 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 TTC23Q5W5X9 447 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 SLC22A10Q63ZE4 541 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 PAMR1Q6UXH9 720 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 APTXQ7Z2E3 356 aaKnown RBP3.8□□□□□ -1.8
LSM5-209ENST00000468872 VASH2Q86V25 355 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 FAM133AQ8N9E0 248 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 OR52M1Q8NGK5 317 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 IL1F10Q8WWZ1 152 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 PSMG2Q969U7 264 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 SENP8Q96LD8 212 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 C12orf66Q96MD2 445 aa3.8□□□□□ -1.8
LSM5-209ENST00000468872 SIGLEC12Q96PQ1 595 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms