RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	CDK5	Q00535	292 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	ZNF117	Q03924	483 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	PIGF	Q07326	219 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	EFR3A	Q14156	821 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	GPR141	Q7Z602	305 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	SPART	Q8N0X7	666 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	CLDN22	Q8N7P3	220 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	ZNF540	Q8NDQ6	660 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	OR5L2	Q8NGL0	311 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	OR8D4	Q8NGM9	314 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	FANK1	Q8TC84	345 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	NODAL	Q96S42	347 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	PHOX2B	Q99453	314 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	PRRX2	Q99811	253 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	RHNO1	Q9BSD3	238 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	ZNF426	Q9BUY5	554 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	DPH1	Q9BZG8	443 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	CCDC90B	Q9GZT6	254 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	LAT2	Q9GZY6	243 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	C20orf141	Q9NUB4	165 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	FAM86C1	Q9NVL1	165 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	ERVK-18	Q9QC07	812 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	NPFFR2	Q9Y5X5	522 aa		11.27	□□□□□ -0.61
HDLBP-231	ENST00000467435	SDK2	Q58EX2	2172 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	TMEM200C	A6NKL6	621 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	C9orf172	C9J069	976 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	ALG1L2	C9J202	215 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	CDC42EP2	O14613	210 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	GNB5	O14775	395 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	HCRTR2	O43614	444 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	RGS10	O43665	173 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	NDUFB5	O43674	189 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	IGHE	P01854	428 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	CD63	P08962	238 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	MAK	P20794	623 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	ENDOU	P21128	410 aa	Known RBP	11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	SLC6A8	P48029	635 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	NUDT6	P53370	316 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	SNRPG	P62308	76 aa	Known RBP	11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	TRIP6	Q15654	476 aa	Known RBP	11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	BTBD16	Q32M84	506 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	C3orf38	Q5JPI3	329 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	WBP2NL	Q6ICG8	309 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	SLC27A4	Q6P1M0	643 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	CBLN3	Q6UW01	205 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	AHSA2	Q719I0	299 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	PIP4P1	Q86T03	277 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	MARCH3	Q86UD3	253 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	CDK20	Q8IZL9	346 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	SLC22A8	Q8TCC7	542 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	CT55	Q8WUE5	264 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	OSTF1	Q92882	214 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	TMIGD2	Q96BF3	282 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	C3orf49	Q96BT1	292 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	BPIFA2	Q96DR5	249 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	IL4I1	Q96RQ9	567 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	PRRG3	Q9BZD7	231 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	RTN4R	Q9BZR6	473 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	ZNF700	Q9H0M5	742 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	DUSP21	Q9H596	190 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	ATP13A2	Q9NQ11	1180 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	MEPE	Q9NQ76	525 aa	Predicted RBP	11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	PLCXD1	Q9NUJ7	323 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	CLN6	Q9NWW5	311 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	TVP23B	Q9NYZ1	205 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	PADI1	Q9ULC6	663 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	PCDHGA3	Q9Y5H0	932 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435	HS3ST3B1	Q9Y662	390 aa		11.26	□□□□□ -0.61
HDLBP-231	ENST00000467435		A0A087WUJ7	227 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435		A0A1W2PNU3	283 aa	Predicted RBP	11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	SH3D21	A4FU49	640 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	CCDC160	A6NGH7	325 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	ENO4	A6NNW6	628 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	EFCAB9	A8MZ26	197 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	PRKY	O43930	277 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	FADS1	O60427	444 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	EIF4E2	O60573	245 aa	Known RBP	11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	ZNF354A	O60765	605 aa	Predicted RBP	11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	MRPS14	O60783	128 aa	Known RBP	11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	MT-ND2	P03891	347 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	RAB40AL	P0C0E4	278 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	SAG	P10523	405 aa	Predicted RBP	11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	JUNB	P17275	347 aa	Predicted RBP	11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	FUT1	P19526	365 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	GIPR	P48546	466 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	PCYT1A	P49585	367 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	TMED10	P49755	219 aa	Known RBP	11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	FBXW4	P57775	412 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	CRYZ	Q08257	329 aa	Known RBP	11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	EXT1	Q16394	746 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	PGGHG	Q32M88	737 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	ELOA3B	Q3SY89	546 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	CLEC12A	Q5QGZ9	265 aa		11.25	□□□□□ -0.61
HDLBP-231	ENST00000467435	TMEM201	Q5SNT2	666 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms