RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 DBNDD1Q9H9R9 158 aa2.58□□□□□ -2
SMC4-207ENST00000467263 NGBQ9NPG2 151 aa2.58□□□□□ -2
SMC4-207ENST00000467263 WRAP73Q9P2S5 460 aaPredicted RBP2.58□□□□□ -2
SMC4-207ENST00000467263 RAB26Q9ULW5 256 aa2.58□□□□□ -2
SMC4-207ENST00000467263 MGAT4BQ9UQ53 548 aa2.58□□□□□ -2
SMC4-207ENST00000467263 ZNFX1Q9P2E3 1918 aaKnown RBP2.58□□□□□ -2
SMC4-207ENST00000467263 TRBV6-6A0A0A6YYG2 114 aa2.57□□□□□ -2
SMC4-207ENST00000467263 KIF2AO00139 706 aaPredicted RBP2.57□□□□□ -2
SMC4-207ENST00000467263 INSP01308 110 aa2.57□□□□□ -2
SMC4-207ENST00000467263 IGHV4-34P06331 123 aa2.57□□□□□ -2
SMC4-207ENST00000467263 STMN1P16949 149 aa2.57□□□□□ -2
SMC4-207ENST00000467263 CCNCP24863 283 aa2.57□□□□□ -2
SMC4-207ENST00000467263 DPP4P27487 766 aa2.57□□□□□ -2
SMC4-207ENST00000467263 HNRNPA3P51991 378 aaKnown RBP2.57□□□□□ -2
SMC4-207ENST00000467263 UNC119Q13432 240 aa2.57□□□□□ -2
SMC4-207ENST00000467263 SYPL1Q16563 259 aa2.57□□□□□ -2
SMC4-207ENST00000467263 LINC01620Q4KN68 170 aa2.57□□□□□ -2
SMC4-207ENST00000467263 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
SMC4-207ENST00000467263 PLBD1Q6P4A8 553 aa2.57□□□□□ -2
SMC4-207ENST00000467263 RNF165Q6ZSG1 346 aa2.57□□□□□ -2
SMC4-207ENST00000467263 CENPUQ71F23 418 aa2.57□□□□□ -2
SMC4-207ENST00000467263 VRK2Q86Y07 508 aa2.57□□□□□ -2
SMC4-207ENST00000467263 MTURNQ8N3F0 131 aa2.57□□□□□ -2
SMC4-207ENST00000467263 MRPL43Q8N983 215 aaKnown RBP2.57□□□□□ -2
SMC4-207ENST00000467263 NANPQ8TBE9 248 aa2.57□□□□□ -2
SMC4-207ENST00000467263 PAQR8Q8TEZ7 354 aa2.57□□□□□ -2
SMC4-207ENST00000467263 RPUSD4Q96CM3 377 aaKnown RBP2.57□□□□□ -2
SMC4-207ENST00000467263 POLR2J2Q9GZM3 115 aaKnown RBP2.57□□□□□ -2
SMC4-207ENST00000467263 POLR2J3Q9H1A7 115 aaKnown RBP2.57□□□□□ -2
SMC4-207ENST00000467263 RSPH9Q9H1X1 276 aaPredicted RBP2.57□□□□□ -2
SMC4-207ENST00000467263 ECT2Q9H8V3 914 aa2.57□□□□□ -2
SMC4-207ENST00000467263 PATZ1Q9HBE1 687 aaKnown RBP2.57□□□□□ -2
SMC4-207ENST00000467263 B3GNT2Q9NY97 397 aa2.57□□□□□ -2
SMC4-207ENST00000467263 ATXN10Q9UBB4 475 aa2.57□□□□□ -2
SMC4-207ENST00000467263 BTNL2Q9UIR0 455 aa2.57□□□□□ -2
SMC4-207ENST00000467263 ZNF223Q9UK11 482 aaPredicted RBP2.57□□□□□ -2
SMC4-207ENST00000467263 UGT2A1Q9Y4X1 527 aa2.57□□□□□ -2
SMC4-207ENST00000467263 OARD1Q9Y530 152 aa2.57□□□□□ -2
SMC4-207ENST00000467263 WSB1Q9Y6I7 421 aa2.57□□□□□ -2
SMC4-207ENST00000467263 SPACA6W5XKT8 324 aa2.57□□□□□ -2
SMC4-207ENST00000467263 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
SMC4-207ENST00000467263 A0A1B0GWB2 263 aa2.56□□□□□ -2
SMC4-207ENST00000467263 ESYT2A0FGR8 921 aa2.56□□□□□ -2
SMC4-207ENST00000467263 A6NDX4 124 aa2.56□□□□□ -2
SMC4-207ENST00000467263 JAK2O60674 1132 aa2.56□□□□□ -2
SMC4-207ENST00000467263 HCN1O60741 890 aa2.56□□□□□ -2
SMC4-207ENST00000467263 SEC22BO75396 215 aa2.56□□□□□ -2
SMC4-207ENST00000467263 OR4F21O95013 312 aa2.56□□□□□ -2
SMC4-207ENST00000467263 KLF8O95600 359 aaPredicted RBP2.56□□□□□ -2
SMC4-207ENST00000467263 IGF1P05019 195 aa2.56□□□□□ -2
SMC4-207ENST00000467263 DNAJB1P25685 340 aa2.56□□□□□ -2
SMC4-207ENST00000467263 DLSTP36957 453 aa2.56□□□□□ -2
SMC4-207ENST00000467263 MTTPP55157 894 aa2.56□□□□□ -2
SMC4-207ENST00000467263 NSDHLQ15738 373 aa2.56□□□□□ -2
SMC4-207ENST00000467263 ZNF311Q5JNZ3 666 aa2.56□□□□□ -2
SMC4-207ENST00000467263 FAHD2BQ6P2I3 314 aaPredicted RBP2.56□□□□□ -2
SMC4-207ENST00000467263 NIPAL3Q6P499 406 aa2.56□□□□□ -2
SMC4-207ENST00000467263 SYVN1Q86TM6 617 aa2.56□□□□□ -2
SMC4-207ENST00000467263 TMEM17Q86X19 198 aa2.56□□□□□ -2
SMC4-207ENST00000467263 ZNF786Q8N393 782 aa2.56□□□□□ -2
SMC4-207ENST00000467263 Q8N9W7 124 aa2.56□□□□□ -2
SMC4-207ENST00000467263 DNAJA4Q8WW22 397 aaPredicted RBP2.56□□□□□ -2
SMC4-207ENST00000467263 FAM151AQ8WW52 585 aa2.56□□□□□ -2
SMC4-207ENST00000467263 SELENOMQ8WWX9 145 aa2.56□□□□□ -2
SMC4-207ENST00000467263 CCDC47Q96A33 483 aaKnown RBP2.56□□□□□ -2
SMC4-207ENST00000467263 STARD4Q96DR4 205 aa2.56□□□□□ -2
SMC4-207ENST00000467263 FAHD2AQ96GK7 314 aa2.56□□□□□ -2
SMC4-207ENST00000467263 AKR1E2Q96JD6 320 aa2.56□□□□□ -2
SMC4-207ENST00000467263 DUSP16Q9BY84 665 aa2.56□□□□□ -2
SMC4-207ENST00000467263 B9D1Q9UPM9 204 aa2.56□□□□□ -2
SMC4-207ENST00000467263 PIN4Q9Y237 131 aaKnown RBP2.56□□□□□ -2
SMC4-207ENST00000467263 A0A0G2JRQ6 117 aa2.55□□□□□ -2
SMC4-207ENST00000467263 KRT87PA6NCN2 255 aa2.55□□□□□ -2
SMC4-207ENST00000467263 FAM166BA8MTA8 275 aa2.55□□□□□ -2
SMC4-207ENST00000467263 ANKRD63C9JTQ0 380 aa2.55□□□□□ -2
SMC4-207ENST00000467263 LANCL1O43813 399 aa2.55□□□□□ -2
SMC4-207ENST00000467263 B3GAT3O94766 335 aa2.55□□□□□ -2
SMC4-207ENST00000467263 SLITRK3O94933 977 aa2.55□□□□□ -2
SMC4-207ENST00000467263 SNAPINO95295 136 aa2.55□□□□□ -2
SMC4-207ENST00000467263 MBD3O95983 291 aa2.55□□□□□ -2
SMC4-207ENST00000467263 OPN1LWP04000 364 aa2.55□□□□□ -2
SMC4-207ENST00000467263 ALOX5P09917 674 aa2.55□□□□□ -2
SMC4-207ENST00000467263 GAP43P17677 238 aa2.55□□□□□ -2
SMC4-207ENST00000467263 RCC1P18754 421 aaPredicted RBP2.55□□□□□ -2
SMC4-207ENST00000467263 CALB2P22676 271 aa2.55□□□□□ -2
SMC4-207ENST00000467263 NMT1P30419 496 aaKnown RBP2.55□□□□□ -2
SMC4-207ENST00000467263 KIF5BP33176 963 aa2.55□□□□□ -2
SMC4-207ENST00000467263 ADRA1AP35348 466 aa2.55□□□□□ -2
SMC4-207ENST00000467263 ASMTP46597 345 aa2.55□□□□□ -2
SMC4-207ENST00000467263 LINC00315P59091 139 aa2.55□□□□□ -2
SMC4-207ENST00000467263 PRPS1P60891 318 aa2.55□□□□□ -2
SMC4-207ENST00000467263 RIPPLY1Q0D2K3 151 aa2.55□□□□□ -2
SMC4-207ENST00000467263 CCDC173Q0VFZ6 552 aa2.55□□□□□ -2
SMC4-207ENST00000467263 ARFRP1Q13795 201 aa2.55□□□□□ -2
SMC4-207ENST00000467263 SLC5A12Q1EHB4 618 aa2.55□□□□□ -2
SMC4-207ENST00000467263 ARMCX2Q7L311 632 aa2.55□□□□□ -2
SMC4-207ENST00000467263 GCNT2Q8N0V5 402 aa2.55□□□□□ -2
SMC4-207ENST00000467263 HDDC3Q8N4P3 179 aa2.55□□□□□ -2
SMC4-207ENST00000467263 FAM71E2Q8N5Q1 922 aa2.55□□□□□ -2
SMC4-207ENST00000467263 OR51G2Q8NGK0 314 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms