RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 CXXC4Q9H2H0 198 aa14.9□□□□□ -0.02
SDHB-203ENST00000466613 WDR55Q9H6Y2 383 aaPredicted RBP14.9□□□□□ -0.02
SDHB-203ENST00000466613 MANSC1Q9H8J5 431 aa14.9□□□□□ -0.02
SDHB-203ENST00000466613 PLEKHF2Q9H8W4 249 aa14.9□□□□□ -0.02
SDHB-203ENST00000466613 CLEC4AQ9UMR7 237 aa14.9□□□□□ -0.02
SDHB-203ENST00000466613 GPR45Q9Y5Y3 372 aa14.9□□□□□ -0.02
SDHB-203ENST00000466613 MAP1AP78559 2803 aaPredicted RBP14.89□□□□□ -0.03
SDHB-203ENST00000466613 CENPVL1A0A0U1RR11 272 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 SLCO1B7G3V0H7 640 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 ETV2O00321 342 aaPredicted RBP14.89□□□□□ -0.03
SDHB-203ENST00000466613 KIAA0513O60268 411 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 PGRP06401 933 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 IL12AP29459 219 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 CHI3L1P36222 383 aaPredicted RBP14.89□□□□□ -0.03
SDHB-203ENST00000466613 CARD18P57730 90 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 FUT5Q11128 374 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 SELENBP1Q13228 472 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 SKP2Q13309 424 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 QPRTQ15274 297 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 ZNF239Q16600 458 aaKnown RBP14.89□□□□□ -0.03
SDHB-203ENST00000466613 SLC25A53Q5H9E4 307 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 TYW3Q6IPR3 259 aaKnown RBP14.89□□□□□ -0.03
SDHB-203ENST00000466613 XAGE5Q8WWM1 108 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 OIT3Q8WWZ8 545 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 RAB8BQ92930 207 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 CPNE4Q96A23 557 aaPredicted RBP14.89□□□□□ -0.03
SDHB-203ENST00000466613 WFIKKN1Q96NZ8 548 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 LAT2Q9GZY6 243 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 TIGARQ9NQ88 270 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 POLE3Q9NRF9 147 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 PLSCR4Q9NRQ2 329 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 KLHL28Q9NXS3 571 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 ZNF226Q9NYT6 803 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 WDR45Q9Y484 360 aa14.89□□□□□ -0.03
SDHB-203ENST00000466613 C9JVG2 144 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 C16orf97H3BN30 126 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 DNAJA2O60884 412 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 CSTAP01040 98 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 RAF1P04049 648 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 PABPC4LP0CB38 370 aaKnown RBP14.88□□□□□ -0.03
SDHB-203ENST00000466613 NID1P14543 1247 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 LRRC74AQ0VAA2 488 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 TMEM176BQ3YBM2 270 aaPredicted RBP14.88□□□□□ -0.03
SDHB-203ENST00000466613 AP1ARQ63HQ0 302 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 GTF2IRD2BQ6EKJ0 949 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 EIF3MQ7L2H7 374 aaKnown RBP14.88□□□□□ -0.03
SDHB-203ENST00000466613 GTF2IRD2Q86UP8 949 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 TRIML2Q8N7C3 387 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 GLB1L3Q8NCI6 653 aaPredicted RBP14.88□□□□□ -0.03
SDHB-203ENST00000466613 RNF128Q8TEB7 428 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 ZFP90Q8TF47 636 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 ZNF524Q96C55 264 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 ROPN1LQ96C74 230 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 MAELQ96JY0 434 aaKnown RBP14.88□□□□□ -0.03
SDHB-203ENST00000466613 OR52E6Q96RD3 313 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 PANX1Q96RD7 426 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 ZBTB18Q99592 522 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 MED18Q9BUE0 208 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 SRXN1Q9BYN0 137 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 SAP130Q9H0E3 1048 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 COQ10BQ9H8M1 238 aa14.88□□□□□ -0.03
SDHB-203ENST00000466613 A0A1W2PPR1 153 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 CCDC154A6NI56 674 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 CYP7B1O75881 506 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 ATE1O95260 518 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 UBTFL6P0CB48 400 aaPredicted RBP14.87□□□□□ -0.03
SDHB-203ENST00000466613 CRYGSP22914 178 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 AGTR1P30556 359 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 HPCAP84074 193 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 MAPK14Q16539 360 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 EXOC3L2Q2M3D2 409 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 NXNQ6DKJ4 435 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 FRRS1Q6ZNA5 592 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 ZNF550Q7Z398 422 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 RNF130Q86XS8 419 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 ZNF619Q8N2I2 560 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 FAM71CQ8NEG0 241 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 ATP6V1C2Q8NEY4 427 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 PIWIL2Q8TC59 973 aaKnown RBP14.87□□□□□ -0.03
SDHB-203ENST00000466613 ROBO4Q8WZ75 1007 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 ST8SIA1Q92185 356 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 MBD6Q96DN6 1003 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 REXO5Q96IC2 774 aaKnown RBP14.87□□□□□ -0.03
SDHB-203ENST00000466613 ALPK1Q96QP1 1244 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 THUMPD3Q9BV44 507 aaKnown RBP14.87□□□□□ -0.03
SDHB-203ENST00000466613 C6orf203Q9P0P8 240 aaPredicted RBP14.87□□□□□ -0.03
SDHB-203ENST00000466613 SLC35A3Q9Y2D2 325 aa14.87□□□□□ -0.03
SDHB-203ENST00000466613 PRAMEF27A3QJZ7 478 aa14.86□□□□□ -0.03
SDHB-203ENST00000466613 DEFB108AA8MXU0 73 aa14.86□□□□□ -0.03
SDHB-203ENST00000466613 HMGN4O00479 90 aa14.86□□□□□ -0.03
SDHB-203ENST00000466613 KLF11O14901 512 aa14.86□□□□□ -0.03
SDHB-203ENST00000466613 SIAH2O43255 324 aa14.86□□□□□ -0.03
SDHB-203ENST00000466613 C1QCP02747 245 aa14.86□□□□□ -0.03
SDHB-203ENST00000466613 IDO1P14902 403 aa14.86□□□□□ -0.03
SDHB-203ENST00000466613 PGCP20142 388 aa14.86□□□□□ -0.03
SDHB-203ENST00000466613 PGM1P36871 562 aa14.86□□□□□ -0.03
SDHB-203ENST00000466613 CDKN2CP42773 168 aa14.86□□□□□ -0.03
SDHB-203ENST00000466613 TXNL4AP83876 142 aaKnown RBP14.86□□□□□ -0.03
SDHB-203ENST00000466613 KEAP1Q14145 624 aa14.86□□□□□ -0.03
SDHB-203ENST00000466613 RNPS1Q15287 305 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms