RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 PSPHP78330 225 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 RPP38P78345 283 aaKnown RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 MRPS15P82914 257 aaKnown RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 B4GALNT1Q00973 533 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 DHODHQ02127 395 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 CFHR3Q02985 330 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 SLAMF1Q13291 335 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 CAPRIN1Q14444 709 aaKnown RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 TMEM132DQ14C87 1099 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 RNPS1Q15287 305 aaKnown RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 TAB1Q15750 504 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 STXBP2Q15833 593 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 RPE65Q16518 533 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 MEP1BQ16820 701 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 CDO1Q16878 200 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 KIF19Q2TAC6 998 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 LINC00303Q3SY05 128 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 CD300EQ496F6 205 aaPredicted RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 CARD16Q5EG05 197 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 ARMCX4Q5H9R4 360 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 CELF3Q5SZQ8 465 aaKnown RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 ARMC4Q5T2S8 1044 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 TMEM236Q5W0B7 351 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 CLEC6AQ6EIG7 209 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 ZNF549Q6P9A3 640 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 CD200R1LQ6Q8B3 271 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 TEX261Q6UWH6 196 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 DPY19L3Q6ZPD9 716 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 LINC00696Q6ZRV3 163 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 PAQR9Q6ZVX9 377 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 EIF3MQ7L2H7 374 aaKnown RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 BHLHA9Q7RTU4 235 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 PRSS42Q7Z5A4 293 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 GALNT10Q86SR1 603 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 PM20D2Q8IYS1 436 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 ADGRF3Q8IZF5 1079 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 DEFB106AQ8N104 65 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 PYROXD2Q8N2H3 581 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 ZNF619Q8N2I2 560 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 LNX2Q8N448 690 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 D2HGDHQ8N465 521 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 C9orf62Q8N4C0 152 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 NPWQ8N729 165 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 TTC29Q8NA56 475 aaPredicted RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 UXS1Q8NBZ7 420 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 RNF149Q8NC42 400 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 B3GALNT2Q8NCR0 500 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 ZNF540Q8NDQ6 660 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 PROKR2Q8NFJ6 384 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 OR7G3Q8NG95 312 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 OR4M2Q8NGB6 313 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 OR4F6Q8NGB9 312 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 OR56A4Q8NGH8 313 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 OR4C15Q8NGM1 316 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 OR8K5Q8NH50 307 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 CEP76Q8TAP6 659 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 ZNF675Q8TD23 568 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 GPR151Q8TDV0 419 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 UTP15Q8TED0 518 aaKnown RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 SSC4DQ8WTU2 575 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 SLC13A3Q8WWT9 602 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 AKAP1Q92667 903 aaKnown RBP eCLIP3.19□□□□□ -1.9
SORT1-202ENST00000466471 SNAPC3Q92966 411 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 SLC25A46Q96AG3 418 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 CREB3L1Q96BA8 519 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 TESCQ96BS2 214 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 PYCR2Q96C36 320 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 TUBGCP3Q96CW5 907 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 GIMAP5Q96F15 307 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 SLC47A1Q96FL8 570 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 SIPA1Q96FS4 1042 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 IMP4Q96G21 291 aaKnown RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 C7orf34Q96L11 122 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 PPP3R2Q96LZ3 170 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 FER1L6-AS2Q96M78 137 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 OPALINQ96PE5 141 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 TEFMQ96QE5 360 aaKnown RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 PELOQ9BRX2 385 aaKnown RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 NAA11Q9BSU3 229 aaPredicted RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 TRIM62Q9BVG3 475 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 OR51B5Q9H339 312 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 PIGUQ9H490 435 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 NARFLQ9H6Q4 476 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 RANBP3Q9H6Z4 567 aaPredicted RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 C8orf33Q9H7E9 229 aaPredicted RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 RNF121Q9H920 327 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 SAP30LQ9HAJ7 183 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 FOLH1BQ9HBA9 442 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 SLC25A19Q9HC21 320 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 CSNK1G1Q9HCP0 422 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 MID1IP1Q9NPA3 183 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 POLE4Q9NR33 117 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 AURKAIP1Q9NWT8 199 aaPredicted RBP3.19□□□□□ -1.9
SORT1-202ENST00000466471 C1orf109Q9NX04 203 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 DPP3Q9NY33 737 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 TAS2R13Q9NYV9 303 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 SLC25A37Q9NYZ2 338 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 GDE1Q9NZC3 331 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 MAT2BQ9NZL9 334 aa3.19□□□□□ -1.9
SORT1-202ENST00000466471 EMC3Q9P0I2 261 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms