RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 PRODHO43272 600 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 DYRK3O43781 588 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 RAB36O95755 333 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 RORAP35398 523 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 PPICP45877 212 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 PSMD4P55036 377 aaKnown RBP16.81■□□□□ 0.28
COL9A3-205ENST00000466192 FOXL2P58012 376 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 RPS3AP61247 264 aaKnown RBP16.81■□□□□ 0.28
COL9A3-205ENST00000466192 ACY1Q03154 408 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 SSX1Q16384 188 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 NDUFAF6Q330K2 333 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 HSDL2Q6YN16 418 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 RNF113BQ8IZP6 322 aaKnown RBP16.81■□□□□ 0.28
COL9A3-205ENST00000466192 NAT6Q93015 286 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 VMP1Q96GC9 406 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 CCDC74BQ96LY2 380 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 NUDT9Q9BW91 350 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 SRPK3Q9UPE1 567 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 CARD8Q9Y2G2 431 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 PCDHGA3Q9Y5H0 932 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 CDH10Q9Y6N8 788 aa16.81■□□□□ 0.28
COL9A3-205ENST00000466192 SURF4O15260 269 aa16.8■□□□□ 0.28
COL9A3-205ENST00000466192 IFI30P13284 250 aa16.8■□□□□ 0.28
COL9A3-205ENST00000466192 MAKP20794 623 aa16.8■□□□□ 0.28
COL9A3-205ENST00000466192 IDUAP35475 653 aa16.8■□□□□ 0.28
COL9A3-205ENST00000466192 TRIM61Q5EBN2 209 aa16.8■□□□□ 0.28
COL9A3-205ENST00000466192 SHISA6Q6ZSJ9 500 aa16.8■□□□□ 0.28
COL9A3-205ENST00000466192 ATCAYQ86WG3 371 aa16.8■□□□□ 0.28
COL9A3-205ENST00000466192 NANOGP1Q8N7R0 232 aa16.8■□□□□ 0.28
COL9A3-205ENST00000466192 OR2T33Q8NG76 320 aa16.8■□□□□ 0.28
COL9A3-205ENST00000466192 TEX12Q9BXU0 123 aa16.8■□□□□ 0.28
COL9A3-205ENST00000466192 SLC7A5P2Q9GIP4 190 aa16.8■□□□□ 0.28
COL9A3-205ENST00000466192 DIMT1Q9UNQ2 313 aaKnown RBP16.8■□□□□ 0.28
COL9A3-205ENST00000466192 SYNDIG1LA6NDD5 238 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 SERINC4A6NH21 518 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 CLDN25C9JDP6 229 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 MYL12BO14950 172 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 POLR1CO15160 346 aaPredicted RBP16.79■□□□□ 0.28
COL9A3-205ENST00000466192 SCG5P05408 212 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 HBQ1P09105 142 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 HOXD12P35452 270 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 UGT2B10P36537 528 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 TUBA1BP68363 451 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 PRKCDQ05655 676 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 PGGHGQ32M88 737 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 C1QTNF12Q5T7M4 302 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 USP43Q70EL4 1123 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 TUBA1AQ71U36 451 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 BTLAQ7Z6A9 289 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 CYP4Z2PQ8N1L4 340 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 TMCO5AQ8N6Q1 288 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 LSMEM1Q8N8F7 131 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 PROKR2Q8NFJ6 384 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 IFI44Q8TCB0 444 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 ADIPOR1Q96A54 375 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 RNFT2Q96EX2 444 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 TAPBPLQ9BX59 468 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 TRIM2Q9C040 744 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 HHATLQ9HCP6 504 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 SIDT1Q9NXL6 827 aaKnown RBP16.79■□□□□ 0.28
COL9A3-205ENST00000466192 PAIP2BQ9ULR5 123 aaKnown RBP16.79■□□□□ 0.28
COL9A3-205ENST00000466192 WDFY3Q8IZQ1 3526 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 UNC119BA6NIH7 251 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 SNTNA6NMZ2 147 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 CHP2O43745 196 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 SLC2A10O95528 541 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 CSTAP01040 98 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 ETV5P41161 510 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 MTNR1AP48039 350 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 ETV1P50549 477 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 KLHL22Q53GT1 634 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 KLHL26Q53HC5 615 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 LANCL3Q6ZV70 420 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 SHFQ7M4L6 423 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 RABEPKQ7Z6M1 372 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 CMIPQ8IY22 773 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 DTWD2Q8NBA8 298 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 CEP76Q8TAP6 659 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 SLC35B4Q969S0 331 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 LCORQ96JN0 433 aaPredicted RBP16.79■□□□□ 0.28
COL9A3-205ENST00000466192 OR52D1Q9H346 318 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 TMEM165Q9HC07 324 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 MEPEQ9NQ76 525 aaPredicted RBP16.79■□□□□ 0.28
COL9A3-205ENST00000466192 MPDZO75970 2070 aa16.79■□□□□ 0.28
COL9A3-205ENST00000466192 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.78■□□□□ 0.28
COL9A3-205ENST00000466192 RFPL3O75679 317 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 IL33O95760 270 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 ZGLP1P0C6A0 271 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 GAS1P54826 345 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 FXYD6P3P58550 94 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 ZSWIM7Q19AV6 140 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 PWWP2BQ6NUJ5 590 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 C19orf48Q6RUI8 117 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 ZNF550Q7Z398 422 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 AMER2Q8N7J2 671 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 CLDN22Q8N7P3 220 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 OR14A16Q8NHC5 309 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 DAZLQ92904 295 aaKnown RBP16.78■□□□□ 0.28
COL9A3-205ENST00000466192 GAL3ST4Q96RP7 486 aa16.78■□□□□ 0.28
COL9A3-205ENST00000466192 UBQLN3Q9H347 655 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms