RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 NPRL3Q12980 569 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 DUSP8Q13202 625 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 TRMT12Q53H54 448 aaKnown RBP12.69□□□□□ -0.38
HDAC6-215ENST00000465457 DCST1Q5T197 706 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 DCST2Q5T1A1 773 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 DEF8Q6ZN54 512 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 FRRS1Q6ZNA5 592 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 QSOX2Q6ZRP7 698 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 ZNF619Q8N2I2 560 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 OR11G2Q8NGC1 345 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 OR52P1PQ8NH57 321 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 FBLIM1Q8WUP2 373 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 FEVQ99581 238 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 FNDC11Q9BVV2 318 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 ALOXE3Q9BYJ1 711 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 SOX17Q9H6I2 414 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-215ENST00000465457 NMNAT1Q9HAN9 279 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-215ENST00000465457 VCX3AQ9NNX9 186 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 CTSFQ9UBX1 484 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 PRODH2Q9UF12 536 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 NDRG4Q9ULP0 352 aaKnown RBP12.69□□□□□ -0.38
HDAC6-215ENST00000465457 PCDHGB6Q9Y5F9 930 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 PCDHGB5Q9Y5G0 923 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 GMPPBQ9Y5P6 360 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 VPS13CQ709C8 3753 aa12.69□□□□□ -0.38
HDAC6-215ENST00000465457 NSD1Q96L73 2696 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-215ENST00000465457 AGAP5A6NIR3 686 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 MED26O95402 600 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 CBX7O95931 251 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 CCDC159P0C7I6 412 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 CD99P14209 185 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 FBLP22087 321 aaKnown RBP12.68□□□□□ -0.38
HDAC6-215ENST00000465457 RPS4Y1P22090 263 aaKnown RBP12.68□□□□□ -0.38
HDAC6-215ENST00000465457 CBLP22681 906 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 PIGAP37287 484 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 IFNGR2P38484 337 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 TNFSF10P50591 281 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 PSMD4P55036 377 aaKnown RBP12.68□□□□□ -0.38
HDAC6-215ENST00000465457 CXCR4P61073 352 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 ESRRGP62508 458 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 ARG2P78540 354 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 RNF220Q5VTB9 566 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 TYW3Q6IPR3 259 aaKnown RBP12.68□□□□□ -0.38
HDAC6-215ENST00000465457 XKRXQ6PP77 449 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 TTLL10Q6ZVT0 673 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 GALNT5Q7Z7M9 940 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 DEPDC4Q8N2C3 294 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 SLC5A8Q8N695 610 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 METTL27Q8N6F8 245 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-215ENST00000465457 ACBD4Q8NC06 268 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 OR52R1Q8NGF1 315 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 VANGL1Q8TAA9 524 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-215ENST00000465457 GPR151Q8TDV0 419 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 ZNF566Q969W8 418 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 OTUB1Q96FW1 271 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-215ENST00000465457 HRASLS5Q96KN8 279 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 ART5Q96L15 291 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 SDF2Q99470 211 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 G6PC3Q9BUM1 346 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 ZNF304Q9HCX3 659 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 CFL2Q9Y281 166 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 ZNF443Q9Y2A4 671 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-215ENST00000465457 KCNE3Q9Y6H6 103 aa12.68□□□□□ -0.38
HDAC6-215ENST00000465457 E9PQ18 207 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 AP3D1O14617 1153 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 FMO6PO60774 539 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 SLC19A2O60779 497 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 MRPS14O60783 128 aaKnown RBP12.67□□□□□ -0.38
HDAC6-215ENST00000465457 SEC24DO94855 1032 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-215ENST00000465457 CLDN14O95500 239 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 CLIC3O95833 236 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 CELA2AP08217 269 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 IL7RP16871 459 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 TTKP33981 857 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 TRHRP34981 398 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-215ENST00000465457 SOX18P35713 384 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 YAP1P46937 504 aaKnown RBP12.67□□□□□ -0.38
HDAC6-215ENST00000465457 UGT2B15P54855 530 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 PSPHP78330 225 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 IL1RL1Q01638 556 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 FUT7Q11130 342 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 LAPTM4AQ15012 233 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 FGD3Q5JSP0 725 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 FAAH2Q6GMR7 532 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 RANBP3LQ86VV4 465 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-215ENST00000465457 OR52J3Q8NH60 311 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 ADAMTS16Q8TE57 1224 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 PSMF1Q92530 271 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 SLC35B4Q969S0 331 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 C8orf44Q96CB5 159 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 DGCR6LQ9BY27 220 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 RBCK1Q9BYM8 510 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 FOLH1BQ9HBA9 442 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 ZNF160Q9HCG1 818 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 Q9N2J8 555 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 MKKSQ9NPJ1 570 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-215ENST00000465457 C14orf105Q9NVL8 296 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 A4GNTQ9UNA3 340 aa12.67□□□□□ -0.38
HDAC6-215ENST00000465457 J3KTA2 159 aa12.66□□□□□ -0.38
HDAC6-215ENST00000465457 M0R3H8 397 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms