RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 TRGV8A0A0C4DH27 118 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 ELOVL7A1L3X0 281 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 CFAP73A6NFT4 308 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 CLDN24A6NM45 220 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 GMFGO60234 142 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 MFN2O95140 757 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 CALB2P22676 271 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 ELK4P28324 431 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 SLC7A2P52569 658 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 PER3P56645 1201 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 EEFSECP57772 596 aaKnown RBP15.33■□□□□ 0.04
USP39-211ENST00000465282 C3AR1Q16581 482 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 NDUFAF6Q330K2 333 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 SPATS1Q496A3 300 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 MYO7BQ6PIF6 2116 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 ZNF836Q6ZNA1 936 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 CD163Q86VB7 1156 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 ARMC8Q8IUR7 673 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 PGAM4Q8N0Y7 254 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 CNOT9Q92600 299 aaKnown RBP15.33■□□□□ 0.04
USP39-211ENST00000465282 PINK1Q9BXM7 581 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 KLHL28Q9NXS3 571 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 TMEM181Q9P2C4 612 aa15.33■□□□□ 0.04
USP39-211ENST00000465282 MED12Q93074 2177 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 E9PLN8 166 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 M0QX08 132 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 NME4O00746 187 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 NTN1O95631 604 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 IFNA14P01570 189 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 C8BP07358 591 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 ZNF708P17019 499 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 PRKCAP17252 672 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 ME2P23368 584 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 PSMA4P25789 261 aaKnown RBP15.32■□□□□ 0.04
USP39-211ENST00000465282 FKBP2P26885 142 aaKnown RBP15.32■□□□□ 0.04
USP39-211ENST00000465282 ACVR2AP27037 513 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 HTR3AP46098 478 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 LHX2P50458 406 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 RNF144AP50876 292 aaPredicted RBP15.32■□□□□ 0.04
USP39-211ENST00000465282 RAC1P63000 192 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 LIPEQ05469 1076 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 QPRTQ15274 297 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 EMC4Q5J8M3 183 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 TMEM211Q6ICI0 200 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 C16orf89Q6UX73 402 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 HMGN2P46Q86SG4 172 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 MICU2Q8IYU8 434 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 CLIP4Q8N3C7 705 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 ZPLD1Q8TCW7 415 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 WDYHV1Q96HA8 205 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 VKORC1Q9BQB6 163 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 ALG2Q9H553 416 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 PIF1Q9H611 641 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 PNPLA3Q9NST1 481 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 ACER3Q9NUN7 267 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 RLIMQ9NVW2 624 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 TINAGQ9UJW2 476 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 SLC13A4Q9UKG4 626 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 ZNF337Q9Y3M9 751 aa15.32■□□□□ 0.04
USP39-211ENST00000465282 CCT8L1PA6NM43 557 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 SYT5O00445 386 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 LRRTM2O43300 516 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 BCAS1O75363 584 aaPredicted RBP15.31■□□□□ 0.04
USP39-211ENST00000465282 GCM2O75603 506 aaPredicted RBP15.31■□□□□ 0.04
USP39-211ENST00000465282 POU3F2P20265 443 aaPredicted RBP15.31■□□□□ 0.04
USP39-211ENST00000465282 AQP1P29972 269 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 CPA2P48052 419 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 MAP2K6P52564 334 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 SESN3P58005 492 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 MXRA7P84157 204 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 PLAURQ03405 335 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 EPS8Q12929 822 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 C1QL3Q5VWW1 255 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 MEIOBQ8N635 442 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 OR5M9Q8NGP3 310 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 ZNF563Q8TA94 476 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 SLC26A7Q8TE54 656 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 PHF10Q8WUB8 498 aaKnown RBP15.31■□□□□ 0.04
USP39-211ENST00000465282 RNF145Q96MT1 663 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 CAMK2AQ9UQM7 478 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 MEMO1Q9Y316 297 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 CHST2Q9Y4C5 530 aa15.31■□□□□ 0.04
USP39-211ENST00000465282 CLEC18AA5D8T8 446 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 GJE1A6NN92 205 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 B2RBV5 119 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 PYCARD-AS1I3L0S3 204 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 CCL21O00585 134 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 GP1BBP13224 206 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 RYKP34925 604 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 APOBEC1P41238 236 aaKnown RBP15.3■□□□□ 0.04
USP39-211ENST00000465282 ACAA2P42765 397 aaKnown RBP15.3■□□□□ 0.04
USP39-211ENST00000465282 CLDN18P56856 261 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 COPZ1P61923 177 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 TOMM34Q15785 309 aaPredicted RBP15.3■□□□□ 0.04
USP39-211ENST00000465282 SAMD4BQ5PRF9 694 aaKnown RBP15.3■□□□□ 0.04
USP39-211ENST00000465282 ZNF585AQ6P3V2 769 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 CLEC18BQ6UXF7 455 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 GRINAQ7Z429 371 aa15.3■□□□□ 0.04
USP39-211ENST00000465282 ULK2Q8IYT8 1036 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms