RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 KLF18A0A0U1RQI7 1052 aa3□□□□□ -1.93
CLK1-208ENST00000464454 SMIM28A0A1B0GU29 152 aa3□□□□□ -1.93
CLK1-208ENST00000464454 GPR89AB7ZAQ6 455 aa3□□□□□ -1.93
CLK1-208ENST00000464454 BTN3A3O00478 584 aa3□□□□□ -1.93
CLK1-208ENST00000464454 TNFSF11O14788 317 aa3□□□□□ -1.93
CLK1-208ENST00000464454 N4BP1O75113 896 aaKnown RBP3□□□□□ -1.93
CLK1-208ENST00000464454 P0C879 139 aa3□□□□□ -1.93
CLK1-208ENST00000464454 GPR89BP0CG08 455 aa3□□□□□ -1.93
CLK1-208ENST00000464454 CYP2B6P20813 491 aa3□□□□□ -1.93
CLK1-208ENST00000464454 HNF1AP20823 631 aa3□□□□□ -1.93
CLK1-208ENST00000464454 VDAC1P21796 283 aa3□□□□□ -1.93
CLK1-208ENST00000464454 EPHX2P34913 555 aa3□□□□□ -1.93
CLK1-208ENST00000464454 GCKP35557 465 aa3□□□□□ -1.93
CLK1-208ENST00000464454 SLC26A2P50443 739 aa3□□□□□ -1.93
CLK1-208ENST00000464454 CCDC152Q4G0S7 254 aa3□□□□□ -1.93
CLK1-208ENST00000464454 LRRC23Q53EV4 343 aaPredicted RBP3□□□□□ -1.93
CLK1-208ENST00000464454 ATF7IP2Q5U623 682 aa3□□□□□ -1.93
CLK1-208ENST00000464454 LIPNQ5VXI9 398 aa3□□□□□ -1.93
CLK1-208ENST00000464454 TTC23Q5W5X9 447 aa3□□□□□ -1.93
CLK1-208ENST00000464454 TMEM225Q6GV28 225 aa3□□□□□ -1.93
CLK1-208ENST00000464454 KCNIP4Q6PIL6 250 aa3□□□□□ -1.93
CLK1-208ENST00000464454 TFAP2EQ6VUC0 442 aa3□□□□□ -1.93
CLK1-208ENST00000464454 TRPM8Q7Z2W7 1104 aa3□□□□□ -1.93
CLK1-208ENST00000464454 MOB3BQ86TA1 216 aa3□□□□□ -1.93
CLK1-208ENST00000464454 VASH2Q86V25 355 aa3□□□□□ -1.93
CLK1-208ENST00000464454 TPRA1Q86W33 373 aa3□□□□□ -1.93
CLK1-208ENST00000464454 ZNF677Q86XU0 584 aa3□□□□□ -1.93
CLK1-208ENST00000464454 DHRSXQ8N5I4 330 aa3□□□□□ -1.93
CLK1-208ENST00000464454 KIR3DL3Q8N743 410 aa3□□□□□ -1.93
CLK1-208ENST00000464454 SLC5A11Q8WWX8 675 aa3□□□□□ -1.93
CLK1-208ENST00000464454 FGGYQ96C11 551 aa3□□□□□ -1.93
CLK1-208ENST00000464454 HAVCR1Q96D42 359 aa3□□□□□ -1.93
CLK1-208ENST00000464454 MS4A14Q96JA4 679 aa3□□□□□ -1.93
CLK1-208ENST00000464454 NOL4LQ96MY1 436 aaPredicted RBP3□□□□□ -1.93
CLK1-208ENST00000464454 AMDHD1Q96NU7 426 aa3□□□□□ -1.93
CLK1-208ENST00000464454 ZSCAN5AQ9BUG6 496 aa3□□□□□ -1.93
CLK1-208ENST00000464454 TEX13BQ9BXU2 312 aa3□□□□□ -1.93
CLK1-208ENST00000464454 NAT10Q9H0A0 1025 aaKnown RBP3□□□□□ -1.93
CLK1-208ENST00000464454 SLITRK2Q9H156 845 aa3□□□□□ -1.93
CLK1-208ENST00000464454 Q9H3A6 140 aa3□□□□□ -1.93
CLK1-208ENST00000464454 ZNF385DQ9H6B1 395 aa3□□□□□ -1.93
CLK1-208ENST00000464454 FANCFQ9NPI8 374 aa3□□□□□ -1.93
CLK1-208ENST00000464454 C6orf203Q9P0P8 240 aaPredicted RBP3□□□□□ -1.93
CLK1-208ENST00000464454 TBK1Q9UHD2 729 aa3□□□□□ -1.93
CLK1-208ENST00000464454 CA5BQ9Y2D0 317 aa3□□□□□ -1.93
CLK1-208ENST00000464454 MAB21L2Q9Y586 359 aa3□□□□□ -1.93
CLK1-208ENST00000464454 KIF25-AS1Q9Y6Z4 181 aa3□□□□□ -1.93
CLK1-208ENST00000464454 ATAD2BQ9ULI0 1458 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 C15orf38-AP3S2A0A0A6YYH1 394 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 TMEM110-MUSTN1A8MSY1 372 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 E7ESA3 106 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 SULT2B1O00204 365 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 HAT1O14929 419 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 RS1O15537 224 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 TBL1XO60907 577 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 SPAG6O75602 509 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 LYPLA1O75608 230 aaPredicted RBP2.99□□□□□ -1.93
CLK1-208ENST00000464454 CD80P33681 288 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 LYZP61626 148 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 SLC10A7Q0GE19 358 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 AANATQ16613 207 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 LRRC36Q1X8D7 754 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 ISXQ2M1V0 245 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 SPATA46Q5T0L3 261 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 WSCD1Q658N2 575 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 FAM199XQ6PEV8 388 aaPredicted RBP2.99□□□□□ -1.93
CLK1-208ENST00000464454 CXCL17Q6UXB2 119 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 TMEM110Q86TL2 294 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 C17orf82Q86X59 251 aaPredicted RBP2.99□□□□□ -1.93
CLK1-208ENST00000464454 FBXO16Q8IX29 292 aaPredicted RBP2.99□□□□□ -1.93
CLK1-208ENST00000464454 UBQLNLQ8IYU4 475 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 STEAP2Q8NFT2 490 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 OR51G2Q8NGK0 314 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 TCTEX1D2Q8WW35 142 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 BADQ92934 168 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 EMG1Q92979 244 aaKnown RBP2.99□□□□□ -1.93
CLK1-208ENST00000464454 FAM122AQ96E09 287 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 TGM7Q96PF1 710 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 MAPKAP1Q9BPZ7 522 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 CRACR2AQ9BSW2 395 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 EDEM2Q9BV94 578 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 GLIPR2Q9H4G4 154 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 EHD1Q9H4M9 534 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 SMYD3Q9H7B4 428 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 B3GNT2Q9NY97 397 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 PCSK1NQ9UHG2 260 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 LCMT1Q9UIC8 334 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 ANGPTL2Q9UKU9 493 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 SCML2Q9UQR0 700 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 PLLPQ9Y342 182 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 RAI1Q7Z5J4 1906 aaPredicted RBP2.99□□□□□ -1.93
CLK1-208ENST00000464454 TNRQ92752 1358 aa2.99□□□□□ -1.93
CLK1-208ENST00000464454 A0A1B0GWB2 263 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 EPOPA6NHQ4 379 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 ZNF705EA8MWA4 302 aaPredicted RBP2.98□□□□□ -1.93
CLK1-208ENST00000464454 G3V4G9 280 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 HCN1O60741 890 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 ECI2O75521 394 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 GNA14O95837 355 aa2.98□□□□□ -1.93
CLK1-208ENST00000464454 LY6G6DO95868 133 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms