RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 GPC6Q9Y625 555 aaPredicted RBP12.9□□□□□ -0.34
ALMS1-202ENST00000464408 ZNF814B7Z6K7 855 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 C9JVG2 144 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 HS3ST1O14792 307 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 TYROBPO43914 113 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 BCAS1O75363 584 aaPredicted RBP12.89□□□□□ -0.35
ALMS1-202ENST00000464408 C1QCP02747 245 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 PCSK6P29122 969 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 ETV4P43268 484 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 NR1H2P55055 460 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 IFFO1Q0D2I5 559 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 QPRTQ15274 297 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 TAB1Q15750 504 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 PDCD2Q16342 344 aaPredicted RBP12.89□□□□□ -0.35
ALMS1-202ENST00000464408 LSM12Q3MHD2 195 aaKnown RBP12.89□□□□□ -0.35
ALMS1-202ENST00000464408 TMEM201Q5SNT2 666 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 SEZ6L2Q6UXD5 910 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 AENQ8WTP8 325 aaKnown RBP12.89□□□□□ -0.35
ALMS1-202ENST00000464408 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.89□□□□□ -0.35
ALMS1-202ENST00000464408 AKAP1Q92667 903 aaKnown RBP eCLIP12.89□□□□□ -0.35
ALMS1-202ENST00000464408 ZNF775Q96BV0 537 aaPredicted RBP12.89□□□□□ -0.35
ALMS1-202ENST00000464408 ZBTB9Q96C00 473 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 REXO5Q96IC2 774 aaKnown RBP12.89□□□□□ -0.35
ALMS1-202ENST00000464408 ATAD3AQ9NVI7 634 aa12.89□□□□□ -0.35
ALMS1-202ENST00000464408 CR1P17927 2039 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 PLCE1Q9P212 2302 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 WDR91A4D1P6 747 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 H3BNH8 94 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 FCMRO60667 390 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 PRKD3O94806 890 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 CNOT4O95628 575 aaKnown RBP12.88□□□□□ -0.35
ALMS1-202ENST00000464408 ADAP00813 363 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 UBL4AP11441 157 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 DDX5P17844 614 aaKnown RBP12.88□□□□□ -0.35
ALMS1-202ENST00000464408 PRPS1L1P21108 318 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 ADH6P28332 368 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 SERPINB5P36952 375 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 SUMO3P55854 103 aaPredicted RBP12.88□□□□□ -0.35
ALMS1-202ENST00000464408 SKP2Q13309 424 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 RNPS1Q15287 305 aaKnown RBP12.88□□□□□ -0.35
ALMS1-202ENST00000464408 GPR68Q15743 365 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 SLC25A53Q5H9E4 307 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 C6orf120Q7Z4R8 191 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 HMGN2P46Q86SG4 172 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 PRIMA1Q86XR5 153 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 ZNF781Q8N8C0 355 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 OR5W2Q8NH69 310 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 TMEM171Q8WVE6 324 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 MRGPRX4Q96LA9 322 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 ZNF300Q96RE9 604 aaPredicted RBP12.88□□□□□ -0.35
ALMS1-202ENST00000464408 BDH2Q9BUT1 245 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 THUMPD3Q9BV44 507 aaKnown RBP12.88□□□□□ -0.35
ALMS1-202ENST00000464408 ZNF701Q9NV72 531 aaPredicted RBP12.88□□□□□ -0.35
ALMS1-202ENST00000464408 PRSS50Q9UI38 385 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 MKLN1Q9UL63 735 aa12.88□□□□□ -0.35
ALMS1-202ENST00000464408 RNF103-CHMP3A0A140T963 221 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 SERINC4A6NH21 518 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 GJE1A6NN92 205 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 ETV2O00321 342 aaPredicted RBP12.87□□□□□ -0.35
ALMS1-202ENST00000464408 SMAD9O15198 467 aaKnown RBP12.87□□□□□ -0.35
ALMS1-202ENST00000464408 CLOCKO15516 846 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 ZNF264O43296 627 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 CYP7B1O75881 506 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 YES1P07947 543 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 KRT16P08779 473 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 PABPC4LP0CB38 370 aaKnown RBP12.87□□□□□ -0.35
ALMS1-202ENST00000464408 PAX1P15863 534 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 MATN1P21941 496 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 CLDN8P56748 225 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 C21orf58P58505 322 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 PHC1P78364 1004 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 EMX2Q04743 252 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 FUT5Q11128 374 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 SELENBP1Q13228 472 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 CAPRIN1Q14444 709 aaKnown RBP12.87□□□□□ -0.35
ALMS1-202ENST00000464408 MAPK14Q16539 360 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 TIGD2Q4W5G0 525 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 SFRP5Q5T4F7 317 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 GTF2IRD2BQ6EKJ0 949 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 GTF2IRD2Q86UP8 949 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 ANKRD46Q86W74 232 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 ZNF611Q8N823 705 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 STEAP2Q8NFT2 490 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 MOAP1Q96BY2 351 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 TRIM44Q96DX7 344 aaPredicted RBP12.87□□□□□ -0.35
ALMS1-202ENST00000464408 DNAJA3Q96EY1 480 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 SLC35G5Q96KT7 338 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 PRPF18Q99633 342 aaKnown RBP12.87□□□□□ -0.35
ALMS1-202ENST00000464408 PSD2Q9BQI7 771 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 C20orf27Q9GZN8 174 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 NMUR2Q9GZQ4 415 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 OR10A4Q9H209 315 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 OR51I1Q9H343 314 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 AKTIPQ9H8T0 292 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 TIGARQ9NQ88 270 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 LAMP3Q9UQV4 416 aa12.87□□□□□ -0.35
ALMS1-202ENST00000464408 ALPK2Q86TB3 2170 aa12.86□□□□□ -0.35
ALMS1-202ENST00000464408 INAFM1C9JVW0 142 aa12.86□□□□□ -0.35
ALMS1-202ENST00000464408 EIF4E2O60573 245 aaKnown RBP12.86□□□□□ -0.35
ALMS1-202ENST00000464408 SCN2BO60939 215 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms