RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 VKORC1Q9BQB6 163 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 PRDM14Q9GZV8 571 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 PIF1Q9H611 641 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 PNPLA3Q9NST1 481 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 DNAJB12Q9NXW2 375 aaKnown RBP17.92■□□□□ 0.46
COL9A3-204ENST00000463487 ALKBH4Q9NXW9 302 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 TNFRSF10DQ9UBN6 386 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 AP4B1Q9Y6B7 739 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 FREM3P0C091 2139 aa17.92■□□□□ 0.46
COL9A3-204ENST00000463487 CLDN24A6NM45 220 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 H0Y3Z8 333 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 H3BML4 177 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 OIP5O43482 229 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 CPA2P48052 419 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 SLC7A2P52569 658 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 PCBP3P57721 371 aaKnown RBP17.91■□□□□ 0.46
COL9A3-204ENST00000463487 B3GALT5-AS1P59052 145 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 PSME3P61289 254 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 COPZ1P61923 177 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 EEF1A1P68104 462 aaKnown RBP17.91■□□□□ 0.46
COL9A3-204ENST00000463487 TMEM44Q2T9K0 475 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 DHRS4L2Q6PKH6 230 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 C16orf89Q6UX73 402 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 FJX1Q86VR8 437 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 CALHM3Q86XJ0 350 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 CNOT9Q92600 299 aaKnown RBP17.91■□□□□ 0.46
COL9A3-204ENST00000463487 RNF145Q96MT1 663 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 SERINC1Q9NRX5 453 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 ARL8BQ9NVJ2 186 aa17.91■□□□□ 0.46
COL9A3-204ENST00000463487 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 ELOVL7A1L3X0 281 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 GJE1A6NN92 205 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 ZNHIT1O43257 154 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 GP1BBP13224 206 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 PRKCAP17252 672 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 RYKP34925 604 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 HTR3AP46098 478 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 GZMMP51124 257 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 SLC15A3Q8IY34 581 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 OR5M1Q8NGP8 315 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 WDYHV1Q96HA8 205 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 PINK1Q9BXM7 581 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 ALG2Q9H553 416 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 ACER3Q9NUN7 267 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 MEMO1Q9Y316 297 aa17.9■□□□□ 0.46
COL9A3-204ENST00000463487 SPIN1Q9Y657 262 aaPredicted RBP17.9■□□□□ 0.46
COL9A3-204ENST00000463487 FAAHO00519 579 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 ZNF708P17019 499 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 CALB2P22676 271 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 LHX2P50458 406 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 RPS3AP61247 264 aaKnown RBP17.89■□□□□ 0.45
COL9A3-204ENST00000463487 NCALDP61601 193 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 RAC1P63000 192 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 SRYQ05066 204 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 LIPEQ05469 1076 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 FOXF1Q12946 379 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 SELENBP1Q13228 472 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 SLC25A53Q5H9E4 307 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 PDSS1Q5T2R2 415 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 C1orf185Q5T7R7 199 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 C8orf82Q6P1X6 216 aaPredicted RBP17.89■□□□□ 0.45
COL9A3-204ENST00000463487 B3GNT6Q6ZMB0 384 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 TRPM8Q7Z2W7 1104 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 ULK2Q8IYT8 1036 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 UBQLNLQ8IYU4 475 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 MICU2Q8IYU8 434 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 PGAM4Q8N0Y7 254 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 FBXO27Q8NI29 283 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 PHF10Q8WUB8 498 aaKnown RBP17.89■□□□□ 0.45
COL9A3-204ENST00000463487 SMPDL3BQ92485 455 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 NSL1Q96IY1 281 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 ZNF583Q96ND8 569 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 RLIMQ9NVW2 624 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 CMTM6Q9NX76 183 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 PAQR5Q9NXK6 330 aaPredicted RBP17.89■□□□□ 0.45
COL9A3-204ENST00000463487 ADA2Q9NZK5 511 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 ZNF337Q9Y3M9 751 aa17.89■□□□□ 0.45
COL9A3-204ENST00000463487 CCT8L1PA6NM43 557 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 M0QX08 132 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 GSTA4O15217 222 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 GMNNO75496 209 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 FKBP2P26885 142 aaKnown RBP17.88■□□□□ 0.45
COL9A3-204ENST00000463487 APOBEC1P41238 236 aaKnown RBP17.88■□□□□ 0.45
COL9A3-204ENST00000463487 IDH2P48735 452 aaKnown RBP17.88■□□□□ 0.45
COL9A3-204ENST00000463487 SMSP52788 366 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 SESN3P58005 492 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 EPS8Q12929 822 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 EMC4Q5J8M3 183 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 DCST1Q5T197 706 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 C3orf33Q6P1S2 294 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 RPTNQ6XPR3 784 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 C3P1Q6ZMU1 363 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 CCDC80Q76M96 950 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 GRINAQ7Z429 371 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 ZPLD1Q8TCW7 415 aa17.88■□□□□ 0.45
COL9A3-204ENST00000463487 KCTD14Q9BQ13 255 aaPredicted RBP17.88■□□□□ 0.45
COL9A3-204ENST00000463487 SHISA8B8ZZ34 492 aa17.87■□□□□ 0.45
COL9A3-204ENST00000463487 ETV2O00321 342 aaPredicted RBP17.87■□□□□ 0.45
COL9A3-204ENST00000463487 NME4O00746 187 aa17.87■□□□□ 0.45
COL9A3-204ENST00000463487 SEC14L5O43304 696 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms