RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 FHL1Q13642 323 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 FCRLBQ6BAA4 426 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 CBLN3Q6UW01 205 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 PRR23CQ6ZRP0 262 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 TMPRSS11FQ6ZWK6 438 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 C1orf210Q8IVY1 113 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 SLC15A4Q8N697 577 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 NANOGP1Q8N7R0 232 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 BRIX1Q8TDN6 353 aaKnown RBP11.78□□□□□ -0.52
VAPB-203ENST00000463370 ZHX1-C8orf76Q96EF9 292 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 OR6C1Q96RD1 312 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 CHCHD6Q9BRQ6 235 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 LRRN3Q9H3W5 708 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 MED20Q9H944 212 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 HINT3Q9NQE9 182 aaKnown RBP11.78□□□□□ -0.52
VAPB-203ENST00000463370 C14orf105Q9NVL8 296 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 DIMT1Q9UNQ2 313 aaKnown RBP11.78□□□□□ -0.52
VAPB-203ENST00000463370 ERGIC3Q9Y282 383 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 SIGLEC7Q9Y286 467 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 PCDHGA3Q9Y5H0 932 aa11.78□□□□□ -0.52
VAPB-203ENST00000463370 ZC3H12DA2A288 527 aaKnown RBP11.77□□□□□ -0.52
VAPB-203ENST00000463370 SOCS6O14544 535 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 RORAP35398 523 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 PPICP45877 212 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 MTNR1AP48039 350 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 ELAVL1Q15717 326 aaKnown RBP11.77□□□□□ -0.52
VAPB-203ENST00000463370 MOGQ16653 247 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 C19orf48Q6RUI8 117 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 BTLAQ7Z6A9 289 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 CLDN22Q8N7P3 220 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 OR4F15Q8NGB8 312 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 SLC46A1Q96NT5 459 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 ADOQ96SZ5 270 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 HCAR1Q9BXC0 346 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 TRIM2Q9C040 744 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 SLIRPQ9GZT3 109 aaKnown RBP11.77□□□□□ -0.52
VAPB-203ENST00000463370 DCSTAMPQ9H295 470 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 KRCC1Q9NPI7 259 aaPredicted RBP11.77□□□□□ -0.52
VAPB-203ENST00000463370 OSGIN1Q9UJX0 560 aa11.77□□□□□ -0.52
VAPB-203ENST00000463370 LRRTM2O43300 516 aa11.77□□□□□ -0.53
VAPB-203ENST00000463370 RAB36O95755 333 aa11.77□□□□□ -0.53
VAPB-203ENST00000463370 CDH11P55287 796 aa11.77□□□□□ -0.53
VAPB-203ENST00000463370 CTBP2P56545 445 aa11.77□□□□□ -0.53
VAPB-203ENST00000463370 CRYZQ08257 329 aaKnown RBP11.77□□□□□ -0.53
VAPB-203ENST00000463370 SIGLEC14Q08ET2 396 aa11.77□□□□□ -0.53
VAPB-203ENST00000463370 EBPQ15125 230 aaKnown RBP11.77□□□□□ -0.53
VAPB-203ENST00000463370 SPHARQ15513 63 aa11.77□□□□□ -0.53
VAPB-203ENST00000463370 OR2G6Q5TZ20 316 aa11.77□□□□□ -0.53
VAPB-203ENST00000463370 FNDC7Q5VTL7 733 aa11.77□□□□□ -0.53
VAPB-203ENST00000463370 LINC00114Q6XXX2 140 aa11.77□□□□□ -0.53
VAPB-203ENST00000463370 CPOQ8IVL8 374 aa11.77□□□□□ -0.53
VAPB-203ENST00000463370 SUSD2Q9UGT4 822 aa11.77□□□□□ -0.53
VAPB-203ENST00000463370 BDP1A6H8Y1 2624 aa11.77□□□□□ -0.53
VAPB-203ENST00000463370 ADAMTS20P59510 1910 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 POLR1CO15160 346 aaPredicted RBP11.76□□□□□ -0.53
VAPB-203ENST00000463370 PTP4A3O75365 173 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 IL33O95760 270 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 SCG5P05408 212 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 PNLIPP16233 465 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 BIKQ13323 160 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 RHBDD2Q6NTF9 364 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 PWWP2BQ6NUJ5 590 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 ZNF550Q7Z398 422 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 BMP8AQ7Z5Y6 402 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 LRRC17Q8N6Y2 441 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 PROKR2Q8NFJ6 384 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 OTULINQ96BN8 352 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 TRMT61AQ96FX7 289 aaKnown RBP11.76□□□□□ -0.53
VAPB-203ENST00000463370 PLEKHA8Q96JA3 519 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 LCORQ96JN0 433 aaPredicted RBP11.76□□□□□ -0.53
VAPB-203ENST00000463370 CCDC74BQ96LY2 380 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 TNFRSF13CQ96RJ3 184 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 MND1Q9BWT6 205 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 SMOC1Q9H4F8 434 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 APMAPQ9HDC9 416 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 MRPS18AQ9NVS2 196 aaKnown RBP11.76□□□□□ -0.53
VAPB-203ENST00000463370 TECTAO75443 2155 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 FER1L5A0AVI2 2057 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 C2orf92A0A1B0GVN3 265 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 FRG2CA6NGY1 282 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 CCRL2O00421 344 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 TOX3O15405 576 aaPredicted RBP11.76□□□□□ -0.53
VAPB-203ENST00000463370 GMFGO60234 142 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 ICOSLGO75144 302 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 GPX5O75715 221 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 UTS2O95399 124 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 MST1P26927 711 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 IDUAP35475 653 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 PSMD4P55036 377 aaKnown RBP11.76□□□□□ -0.53
VAPB-203ENST00000463370 RAB40BQ12829 278 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 LPAL2Q16609 132 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 PLBD1Q6P4A8 553 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 ULK3Q6PHR2 472 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 FAM71CQ8NEG0 241 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 STT3BQ8TCJ2 826 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 TM9SF4Q92544 642 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 SH3YL1Q96HL8 342 aaPredicted RBP11.76□□□□□ -0.53
VAPB-203ENST00000463370 PLGRKTQ9HBL7 147 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 MCCC2Q9HCC0 563 aa11.76□□□□□ -0.53
VAPB-203ENST00000463370 UBQLN4Q9NRR5 601 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms