RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 A0A1W2PR48 441 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 C4orf51C9J302 202 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 WNT1P04628 370 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 H2AFB2P0C5Z0 115 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 BMP7P18075 431 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 VEGFCP49767 419 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 PDGFRLQ15198 375 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 NDUFA9Q16795 377 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 PLA1AQ53H76 456 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 PRPF38BQ5VTL8 546 aaKnown RBP11.55□□□□□ -0.56
HDAC4-208ENST00000463007 ALKAL2Q6UX46 152 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 LINC01555Q8NAE3 123 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 ZCCHC10Q8TBK6 192 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 NKX3-1Q99801 234 aaPredicted RBP11.55□□□□□ -0.56
HDAC4-208ENST00000463007 PDCD1LG2Q9BQ51 273 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 NT5DC2Q9H857 520 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 KLHL28Q9NXS3 571 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 B3GNT2Q9NY97 397 aa11.55□□□□□ -0.56
HDAC4-208ENST00000463007 COL4A2P08572 1712 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 IGKV1-8A0A0C4DH67 115 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 POU3F2P20265 443 aaPredicted RBP11.54□□□□□ -0.56
HDAC4-208ENST00000463007 BTCP35070 178 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 FGL2Q14314 439 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 SLC9A5Q14940 896 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 ANGPT1Q15389 498 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 ACSM3Q53FZ2 586 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 TRILQ7L0X0 811 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 GDF7Q7Z4P5 450 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 LRRC28Q86X40 367 aaPredicted RBP11.54□□□□□ -0.56
HDAC4-208ENST00000463007 OR5J2Q8NH18 312 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 SUN3Q8TAQ9 357 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 CDS1Q92903 461 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 ZMYND19Q96E35 227 aaPredicted RBP11.54□□□□□ -0.56
HDAC4-208ENST00000463007 SLC41A3Q96GZ6 507 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 SPATA5L1Q9BVQ7 753 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 SEMA4CQ9C0C4 833 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 RSPH9Q9H1X1 276 aaPredicted RBP11.54□□□□□ -0.56
HDAC4-208ENST00000463007 OR52D1Q9H346 318 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 ADAP2Q9NPF8 381 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 MRPL39Q9NYK5 338 aaKnown RBP11.54□□□□□ -0.56
HDAC4-208ENST00000463007 ACAD8Q9UKU7 415 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 M0R233 179 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 SLC19A2O60779 497 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 SIX6O95475 246 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 UCHL1P09936 223 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 NDUFV2P19404 249 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 OMPP47874 163 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 KIAA1024LP59773 190 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 GRK1Q15835 563 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 AADACL4Q5VUY2 407 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 HBMQ6B0K9 141 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 BOLLQ8N9W6 283 aaKnown RBP11.54□□□□□ -0.56
HDAC4-208ENST00000463007 OR13C2Q8NGS9 318 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 GHSRQ92847 366 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 DERL3Q96Q80 235 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 SOSTQ9BQB4 213 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 FUZQ9BT04 418 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 GDE1Q9NZC3 331 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 RCE1Q9Y256 329 aa11.54□□□□□ -0.56
HDAC4-208ENST00000463007 GPR171O14626 319 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 SEC14L5O43304 696 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 GMDSO60547 372 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 GJA4P35212 333 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 MLF2Q15773 248 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-208ENST00000463007 SFRP5Q5T4F7 317 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 TANGO2Q6ICL3 276 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 KCT2Q8NC54 265 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 ZBTB44Q8NCP5 570 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 ABHD4Q8TB40 342 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 CXorf40AQ8TE69 158 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 THAP4Q8WY91 577 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 OSTF1Q92882 214 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 PITHD1Q9GZP4 211 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-208ENST00000463007 SLC38A1Q9H2H9 487 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 FN3KQ9H479 309 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 RANBP3Q9H6Z4 567 aaPredicted RBP11.53□□□□□ -0.56
HDAC4-208ENST00000463007 SFXN1Q9H9B4 322 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 MBNL1Q9NR56 388 aaKnown RBP11.53□□□□□ -0.56
HDAC4-208ENST00000463007 CYSLTR2Q9NS75 346 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 ZNF69Q9UC07 566 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 SERGEFQ9UGK8 458 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 LIPT1Q9Y234 373 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 IGLON5A6NGN9 336 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 SGK494L7N484 410 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 THY1P04216 161 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 MAP2K6P52564 334 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 ERVK-21P61565 698 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 OTPQ5XKR4 325 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 TMEM65Q6PI78 240 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 FIGNL1Q6PIW4 674 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 THSD4Q6ZMP0 1018 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 IDO2Q6ZQW0 420 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 SSX6Q7RTT6 188 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 OAFQ86UD1 273 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 ACOT4Q8N9L9 421 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 RPLP0P6Q8NHW5 317 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 FANK1Q8TC84 345 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 ZC3HAV1LQ96H79 300 aaKnown RBP11.53□□□□□ -0.56
HDAC4-208ENST00000463007 GHITMQ9H3K2 345 aa11.53□□□□□ -0.56
HDAC4-208ENST00000463007 FKRPQ9H9S5 495 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms