RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 Q75L30 129 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 ZNF534Q76KX8 674 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 MAP7D3Q8IWC1 876 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 DCUN1D3Q8IWE4 304 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 ZNF567Q8N184 647 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 MUC20Q8N307 709 aaPredicted RBP4.31□□□□□ -1.72
COPS3-204ENST00000462236 SLC5A8Q8N695 610 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 LSMEM1Q8N8F7 131 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 KCTD6Q8NC69 237 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 OR2L3Q8NG85 312 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 PTPMT1Q8WUK0 201 aaPredicted RBP4.31□□□□□ -1.72
COPS3-204ENST00000462236 ZNF830Q96NB3 372 aaPredicted RBP4.31□□□□□ -1.72
COPS3-204ENST00000462236 OR2A5Q96R48 311 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 GFI1Q99684 422 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 RAB11FIP5Q9BXF6 653 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 RAD21L1Q9H4I0 556 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 FAM96AQ9H5X1 160 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 KCNK13Q9HB14 408 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 SLC35C2Q9NQQ7 365 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 PNPLA3Q9NST1 481 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 WBP11Q9Y2W2 641 aaKnown RBP4.31□□□□□ -1.72
COPS3-204ENST00000462236 TDRKHQ9Y2W6 561 aaKnown RBP4.31□□□□□ -1.72
COPS3-204ENST00000462236 KLF13Q9Y2Y9 288 aaPredicted RBP4.31□□□□□ -1.72
COPS3-204ENST00000462236 FAM169AQ9Y6X4 670 aa4.31□□□□□ -1.72
COPS3-204ENST00000462236 A0A0G2JPF8 293 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 USP27XA6NNY8 438 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 HNRNPCL2B2RXH8 293 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 HNRNPCL3B7ZW38 293 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 H0YIG0 161 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 CCL22O00626 93 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 TFECO14948 347 aaPredicted RBP4.3□□□□□ -1.72
COPS3-204ENST00000462236 P2RX6O15547 441 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 ARHGEF9O43307 516 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 GLSO94925 669 aaPredicted RBP4.3□□□□□ -1.72
COPS3-204ENST00000462236 NSA2O95478 260 aaKnown RBP4.3□□□□□ -1.72
COPS3-204ENST00000462236 TUBBP07437 444 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 FAM106CPP0CH98 169 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 HNRNPCL4P0DMR1 293 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 VPREB1P12018 145 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 CEACAM8P31997 349 aaPredicted RBP4.3□□□□□ -1.72
COPS3-204ENST00000462236 CCR7P32248 378 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 FOXN2P32314 431 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 CYLC1P35663 651 aaPredicted RBP4.3□□□□□ -1.72
COPS3-204ENST00000462236 CYB561P49447 251 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 HLCSP50747 726 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 TERF1P54274 439 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 SLC26A5P58743 744 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 PPP2R2BQ00005 443 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 MAT1AQ00266 395 aaKnown RBP4.3□□□□□ -1.72
COPS3-204ENST00000462236 UBXN1Q04323 297 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 MESDQ14696 234 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 HKDC1Q2TB90 917 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 MFSD4BQ5TF39 518 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 LRRC8BQ6P9F7 803 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 ZNF449Q6P9G9 518 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 UNQ6126/PRO20091Q6UXV3 157 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 TUBA1AQ71U36 451 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 PAQR7Q86WK9 346 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 RPS19BP1Q86WX3 136 aaKnown RBP4.3□□□□□ -1.72
COPS3-204ENST00000462236 TMEM219Q86XT9 240 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.3□□□□□ -1.72
COPS3-204ENST00000462236 C2orf73Q8N5S3 287 aaPredicted RBP4.3□□□□□ -1.72
COPS3-204ENST00000462236 POMGNT2Q8NAT1 580 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 NFAM1Q8NET5 270 aaPredicted RBP4.3□□□□□ -1.72
COPS3-204ENST00000462236 IPMKQ8NFU5 416 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 TMEM255BQ8WV15 326 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 TMEM158Q8WZ71 300 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 ELMO1Q92556 727 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 RNASE6Q93091 150 aaKnown RBP4.3□□□□□ -1.72
COPS3-204ENST00000462236 CDKN2AIPNLQ96HQ2 116 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 DNAJC1Q96KC8 554 aaKnown RBP4.3□□□□□ -1.72
COPS3-204ENST00000462236 CABS1Q96KC9 395 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 SERINC2Q96SA4 455 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 SMC6Q96SB8 1091 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 VAT1Q99536 393 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 TUBA1CQ9BQE3 449 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 C1QTNF4Q9BXJ3 329 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 DRC3Q9H069 523 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 KCNK15Q9H427 330 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 DEPPQ9NTK1 212 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 NLE1Q9NVX2 485 aaPredicted RBP4.3□□□□□ -1.72
COPS3-204ENST00000462236 B4GALT7Q9UBV7 327 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 C19orf25Q9UFG5 118 aaPredicted RBP4.3□□□□□ -1.72
COPS3-204ENST00000462236 POU2F3Q9UKI9 436 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 DLGAP4Q9Y2H0 992 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 HEY1Q9Y5J3 304 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 LIPGQ9Y5X9 500 aa4.3□□□□□ -1.72
COPS3-204ENST00000462236 SAA2-SAA4A0A096LPE2 208 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 A0A0A6YYC8 382 aaPredicted RBP4.29□□□□□ -1.72
COPS3-204ENST00000462236 ZCWPW2A0A1B0GU75 182 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 A0A1W2PS18 150 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 PINLYPA6NC86 204 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 KRT87PA6NCN2 255 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 TRIM64A6NGJ6 449 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 TRIM64BA6NI03 449 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 MAGEB17A8MXT2 336 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 NPIPA2E9PIF3 369 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 NPIPA3F8WFD2 350 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 KLRC4-KLRK1H3BQV0 150 aa4.29□□□□□ -1.72
COPS3-204ENST00000462236 I3L1I5 382 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms