RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 KLHL29Q96CT2 875 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 TUBGCP3Q96CW5 907 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 VMP1Q96GC9 406 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 RBM18Q96H35 190 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 PPP3R2Q96LZ3 170 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 FAIM2Q9BWQ8 316 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 OR8D2Q9GZM6 311 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 WDR55Q9H6Y2 383 aaPredicted RBP7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 ANKRA2Q9H9E1 313 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 WDR41Q9HAD4 459 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 KCNK13Q9HB14 408 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 SLC35C2Q9NQQ7 365 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 INTS9Q9NV88 658 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 GAR1Q9NY12 217 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 ASIC5Q9NY37 505 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 MAT2BQ9NZL9 334 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 ERVK-11Q9UQG0 969 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 ERVK-19Q9WJR5 959 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 DTX4Q9Y2E6 619 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 WBP11Q9Y2W2 641 aaKnown RBP7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 TMED5Q9Y3A6 229 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 CLCA3PQ9Y6N3 262 aa7.35□□□□□ -1.23
ECHDC1-212ENST00000461239 CPAMD8Q8IZJ3 1885 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 GOLGA8QA0A0J9YX86 632 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 A0A1W2PPH5 198 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 GOLGA8OA6NCC3 632 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 NPIPB13A6NJU9 1138 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 FAM90A7PA6NKC0 464 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 NPIPB5A8MRT5 1133 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 FAM90A22PA8MWA6 464 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 FAM90A12PA8MX19 464 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 FAM90A23PA8MXZ1 464 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 NPIPB4C9JG80 1138 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 GOLGA8NF8WBI6 632 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 HDAC3O15379 428 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 TBX19O60806 448 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 SORBS2O94875 1100 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 NADKO95544 446 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 SFTPCP11686 197 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 TNNI3P19429 210 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 CSNK2A2P19784 350 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 IL12AP29459 219 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 FRKP42685 505 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 PLIN5Q00G26 463 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 FOXI1Q12951 378 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 TSTQ16762 297 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 LSM12Q3MHD2 195 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 ATP6AP1LQ52LC2 224 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 ZNF628Q5EBL2 1059 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 FHL5Q5TD97 284 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 CFAP161Q6P656 301 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 RGS9BPQ6ZS82 235 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 Q6ZS92 163 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 IKBIPQ70UQ0 350 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 H1FNTQ75WM6 255 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 BCDIN3DQ7Z5W3 292 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 RPS19BP1Q86WX3 136 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 KRTCAP2Q8N6L1 136 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 ZNF441Q8N8Z8 693 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 FNDC5Q8NAU1 212 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 OR7A2PQ8NGA2 310 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 OR9A2Q8NGT5 310 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 CDC26Q8NHZ8 85 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 AKAP1Q92667 903 aaKnown RBP eCLIP7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 HAS2Q92819 552 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 CIDECQ96AQ7 238 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 ZNF764Q96H86 408 aaPredicted RBP7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 TEX37Q96LM6 180 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 MAGEB18Q96M61 343 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 AMDHD1Q96NU7 426 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 SIGLEC12Q96PQ1 595 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 OR52B2Q96RD2 323 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 CHCHD6Q9BRQ6 235 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 TRIM4Q9C037 500 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 GLIPR2Q9H4G4 154 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 REEP4Q9H6H4 257 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 ANKRD10Q9NXR5 420 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 STMN3Q9NZ72 180 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 ATP6V1HQ9UI12 483 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 B3GNT3Q9Y2A9 372 aa7.34□□□□□ -1.23
ECHDC1-212ENST00000461239 SYNDIG1LA6NDD5 238 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 WWP2O00308 870 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 PRYO14603 147 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 SCAMP2O15127 329 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 OR10H2O60403 315 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 SCN2BO60939 215 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 NEURL1O76050 574 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 WISP2O76076 250 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 ZFAND5O76080 213 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 LAMP1P11279 417 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 CD1EP15812 388 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 EFNA1P20827 205 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 NT5EP21589 574 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 DRD4P21917 467 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 ZFP36L2P47974 494 aaKnown RBP7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 EMDP50402 254 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 TNFSF10P50591 281 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 CLDN8P56748 225 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 C21orf58P58505 322 aa7.33□□□□□ -1.24
ECHDC1-212ENST00000461239 KLRB1Q12918 225 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms