RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 ZNF195O14628 629 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 ABCD4O14678 606 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 SMAD9O15198 467 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 EIF4E2O60573 245 aaKnown RBP12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 DHRS4L1P0CG22 281 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 MYL2P10916 166 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 SLC7A1P30825 629 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 TTKP33981 857 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 CCDC153Q494R4 210 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 ZNF385BQ569K4 471 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 CDC73Q6P1J9 531 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 Q6ZSR9 355 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 C17orf78Q8N4C9 275 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 GATSQ8NAP1 163 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 OR56A1Q8NGH5 318 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 SFXN5Q8TD22 340 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 CIDECQ96AQ7 238 aaPredicted RBP12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 MOAP1Q96BY2 351 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 EGLN2Q96KS0 407 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 DHRS9Q9BPW9 319 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 NMUR2Q9GZQ4 415 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 CXorf36Q9H7Y0 433 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 SIRT3Q9NTG7 399 aaPredicted RBP12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 NPAP1Q9NZP6 1156 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 EMCNQ9ULC0 261 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 B3GALT5Q9Y2C3 310 aa12.86□□□□□ -0.35
DNMT3A-207ENST00000461228 NDUFS8O00217 210 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 GMFGO60234 142 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 CRCPO75575 148 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 URI1O94763 535 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 AK1P00568 194 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 HMGN2P05204 90 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 C8BP07358 591 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 GUSBP08236 651 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 ATP6V1C1P21283 382 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 FKBP2P26885 142 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 FAPQ12884 760 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 CBFBQ13951 182 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 KLHL17Q6TDP4 642 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 CBLN3Q6UW01 205 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 SYT10Q6XYQ8 523 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 ATG4DQ86TL0 474 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 C1orf162Q8NEQ5 155 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 OR5W2Q8NH69 310 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 FBXO27Q8NI29 283 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 GPR119Q8TDV5 335 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 ANP32BQ92688 251 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 NEUROG1Q92886 237 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 KLHDC3Q9BQ90 382 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 CACNG6Q9BXT2 260 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 PPCSQ9HAB8 311 aa12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 ZCCHC3Q9NUD5 404 aaKnown RBP12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 GDF2Q9UK05 429 aaPredicted RBP12.85□□□□□ -0.35
DNMT3A-207ENST00000461228 LSM1O15116 133 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 SCAMP2O15127 329 aaKnown RBP12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 EFNA2O43921 213 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 NDUFS7O75251 213 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 SEC22BO75396 215 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 LYZL6O75951 148 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 PROCP04070 461 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 BMP4P12644 408 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 ENPP1P22413 925 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 IGHV1-2P23083 117 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 HPCAL1P37235 193 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 SLC16A1P53985 500 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 ATP12AP54707 1039 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 CSNK2A1P68400 391 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 DCST2Q5T1A1 773 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 OR7E24Q6IFN5 339 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 SZRD1Q7Z422 152 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 GALNT5Q7Z7M9 940 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 MUC15Q8N387 334 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 ZNF433Q8N7K0 673 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 CCNYL1Q8N7R7 359 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 PHOSPHO1Q8TCT1 267 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 ZNF75CPQ92670 426 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 BOD1Q96IK1 185 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 ACTRT3Q9BYD9 372 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 MYOZ1Q9NP98 299 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 TAS2R16Q9NYV7 291 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 ATP6V1HQ9UI12 483 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 MID2Q9UJV3 735 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 DTNAQ9Y4J8 743 aa12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 NUP214P35658 2090 aaPredicted RBP12.84□□□□□ -0.35
DNMT3A-207ENST00000461228 HEATR1Q9H583 2144 aaKnown RBP12.83□□□□□ -0.35
DNMT3A-207ENST00000461228 ALPK2Q86TB3 2170 aa12.83□□□□□ -0.36
DNMT3A-207ENST00000461228 ESPNB1AK53 854 aa12.83□□□□□ -0.36
DNMT3A-207ENST00000461228 TMEM114B3SHH9 223 aa12.83□□□□□ -0.36
DNMT3A-207ENST00000461228 ZNF264O43296 627 aa12.83□□□□□ -0.36
DNMT3A-207ENST00000461228 RIPK2O43353 540 aa12.83□□□□□ -0.36
DNMT3A-207ENST00000461228 SSX4O60224 188 aa12.83□□□□□ -0.36
DNMT3A-207ENST00000461228 RAMP1O60894 148 aa12.83□□□□□ -0.36
DNMT3A-207ENST00000461228 NUDT14O95848 222 aa12.83□□□□□ -0.36
DNMT3A-207ENST00000461228 CHEK2O96017 543 aa12.83□□□□□ -0.36
DNMT3A-207ENST00000461228 UBL4AP11441 157 aa12.83□□□□□ -0.36
DNMT3A-207ENST00000461228 PRKAG1P54619 331 aa12.83□□□□□ -0.36
DNMT3A-207ENST00000461228 C21orf58P58505 322 aa12.83□□□□□ -0.36
DNMT3A-207ENST00000461228 RPL38P63173 70 aaKnown RBP12.83□□□□□ -0.36
DNMT3A-207ENST00000461228 IRX1P78414 480 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms