RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TMEM71Q6P5X7 295 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 ZCCHC12Q6PEW1 402 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 CBLL1Q75N03 491 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 EIF3MQ7L2H7 374 aaKnown RBP9.64□□□□□ -0.87
HERC4-207ENST00000460168 VTCN1Q7Z7D3 282 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 KMT5CQ86Y97 462 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 PLCZ1Q86YW0 608 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 SLC30A8Q8IWU4 369 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 D2HGDHQ8N465 521 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 CLRN3Q8NCR9 226 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 OR5D16Q8NGK9 328 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 NANPQ8TBE9 248 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 XAGE5Q8WWM1 108 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 EDARADDQ8WWZ3 215 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 PEX11GQ96HA9 241 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 ADAD1Q96M93 576 aaKnown RBP9.64□□□□□ -0.87
HERC4-207ENST00000460168 DPYSL5Q9BPU6 564 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 YIPF4Q9BSR8 244 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 EDEM2Q9BV94 578 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 OPN3Q9H1Y3 402 aaPredicted RBP9.64□□□□□ -0.87
HERC4-207ENST00000460168 ARRDC1-AS1Q9H2J1 176 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 OR51I1Q9H343 314 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 LDAHQ9H6V9 325 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 ANKRA2Q9H9E1 313 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 UNKLQ9H9P5 680 aaKnown RBP9.64□□□□□ -0.87
HERC4-207ENST00000460168 CHMP1AQ9HD42 196 aaPredicted RBP9.64□□□□□ -0.87
HERC4-207ENST00000460168 EQTNQ9NQ60 294 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 NDOR1Q9UHB4 597 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 OAZ3Q9UMX2 235 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 BOLA1Q9Y3E2 137 aa9.64□□□□□ -0.87
HERC4-207ENST00000460168 MYOCOSA0A1B0GUC4 107 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 FITM1A5D6W6 292 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 ZNF879B4DU55 563 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 PCDHGA12O60330 932 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 GPR75O95800 540 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 RPLP0P05388 317 aaKnown RBP9.63□□□□□ -0.87
HERC4-207ENST00000460168 TRAPPC2P0DI81 140 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 TRAPPC2BP0DI82 140 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 OR12D1P0DN82 309 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 FOLR1P15328 257 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 KHKP50053 298 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 SLC13A2Q13183 592 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 PUM1Q14671 1186 aaKnown RBP eCLIP9.63□□□□□ -0.87
HERC4-207ENST00000460168 KLHL12Q53G59 568 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 CYBRD1Q53TN4 286 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 LIPNQ5VXI9 398 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 LRFN4Q6PJG9 635 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 TTLL10Q6ZVT0 673 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 CREB3L2Q70SY1 520 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 SSX9Q7RTT3 188 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 GALNTL5Q7Z4T8 443 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 TPRA1Q86W33 373 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 ADGRG3Q86Y34 549 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 NUP43Q8NFH3 380 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 FAM216AQ8WUB2 273 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 SLC38A5Q8WUX1 472 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 GATAD2BQ8WXI9 593 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 ROBO4Q8WZ75 1007 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 NXPE2Q96DL1 559 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 SLC41A2Q96JW4 573 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 HSH2DQ96JZ2 352 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 ZNF768Q9H5H4 540 aaKnown RBP9.63□□□□□ -0.87
HERC4-207ENST00000460168 COQ10BQ9H8M1 238 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 CUTCQ9NTM9 273 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 EXD2Q9NVH0 621 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 P2RX2Q9UBL9 471 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 MYRFQ9Y2G1 1151 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 A0A087WXM4 84 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 A0A1W2PQM1 296 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 MARCH11A6NNE9 402 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 TOX3O15405 576 aaPredicted RBP9.63□□□□□ -0.87
HERC4-207ENST00000460168 KCNK2O95069 426 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 PPP2R1BP30154 601 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 CCL7P80098 99 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 TXNL4AP83876 142 aaKnown RBP9.63□□□□□ -0.87
HERC4-207ENST00000460168 BTN1A1Q13410 526 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 ETFDHQ16134 617 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 SYT16Q17RD7 645 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 TCEAL6Q6IPX3 200 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 DPPA2Q7Z7J5 298 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 ZDHHC21Q8IVQ6 265 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 OR7G2Q8NG99 324 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 ZFAND1Q8TCF1 268 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 ADAMTS18Q8TE60 1221 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 SLC25A36Q96CQ1 311 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 OTUB1Q96FW1 271 aaPredicted RBP9.63□□□□□ -0.87
HERC4-207ENST00000460168 TMEM19Q96HH6 336 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 NPAS1Q99742 590 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 CXorf21Q9HAI6 301 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 A4GALTQ9NPC4 353 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 FGF21Q9NSA1 209 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 SEMA5BQ9P283 1151 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 SERTAD3Q9UJW9 196 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 LIPT1Q9Y234 373 aa9.63□□□□□ -0.87
HERC4-207ENST00000460168 H0YIG0 161 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 AGRPO00253 132 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 UPK1AO00322 258 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 SOCS2O14508 198 aa9.62□□□□□ -0.87
HERC4-207ENST00000460168 KHNYNO15037 678 aaKnown RBP9.62□□□□□ -0.87
HERC4-207ENST00000460168 SLC28A2O43868 658 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms