RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 ABCE1P61221 599 aaKnown RBP20.3■□□□□ 0.84
PTPN4-207ENST00000460162 ZNF844Q08AG5 666 aa20.3■□□□□ 0.84
PTPN4-207ENST00000460162 CHI3L2Q15782 390 aa20.3■□□□□ 0.84
PTPN4-207ENST00000460162 TOMM34Q15785 309 aaPredicted RBP20.3■□□□□ 0.84
PTPN4-207ENST00000460162 PDZK1Q5T2W1 519 aa20.3■□□□□ 0.84
PTPN4-207ENST00000460162 OR4F3Q6IEY1 312 aa20.3■□□□□ 0.84
PTPN4-207ENST00000460162 PRSS57Q6UWY2 283 aa20.3■□□□□ 0.84
PTPN4-207ENST00000460162 TFAP2EQ6VUC0 442 aa20.3■□□□□ 0.84
PTPN4-207ENST00000460162 FCRLAQ7L513 359 aa20.3■□□□□ 0.84
PTPN4-207ENST00000460162 RAP2CQ9Y3L5 183 aa20.3■□□□□ 0.84
PTPN4-207ENST00000460162 SERINC4A6NH21 518 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 STX11O75558 287 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 SLC7A1P30825 629 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 SKP2Q13309 424 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 QPRTQ15274 297 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 ZNF141Q15928 474 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 TMEM176BQ3YBM2 270 aaPredicted RBP20.29■□□□□ 0.84
PTPN4-207ENST00000460162 C3orf33Q6P1S2 294 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 ZNF704Q6ZNC4 412 aaPredicted RBP20.29■□□□□ 0.84
PTPN4-207ENST00000460162 C6orf120Q7Z4R8 191 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 LRRC34Q8IZ02 419 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 GABRG1Q8N1C3 465 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 SLC43A2Q8N370 569 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 STEAP2Q8NFT2 490 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 RFWD2Q8NHY2 731 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 MIPOL1Q8TD10 442 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 OIT3Q8WWZ8 545 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 ZNF350Q9GZX5 532 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 AKTIPQ9H8T0 292 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 PCDHGB4Q9UN71 923 aa20.29■□□□□ 0.84
PTPN4-207ENST00000460162 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.29■□□□□ 0.84
PTPN4-207ENST00000460162 WDR91A4D1P6 747 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 FAM171A2A8MVW0 826 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 DNAJA2O60884 412 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 GCM2O75603 506 aaPredicted RBP20.28■□□□□ 0.84
PTPN4-207ENST00000460162 AGR2O95994 175 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 DPY19L1Q2PZI1 675 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 ARHGAP11BQ3KRB8 267 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 WFDC8Q8IUA0 241 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 TUSC5Q8IXB3 177 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 OR4A15Q8NGL6 344 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 ST8SIA1Q92185 356 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 ARL8AQ96BM9 186 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 TESCQ96BS2 214 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 PERPQ96FX8 193 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 PPP1R36Q96LQ0 422 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 GSX2Q9BZM3 304 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 DPY30Q9C005 99 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 EXD2Q9NVH0 621 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 ROS1P08922 2347 aa20.28■□□□□ 0.84
PTPN4-207ENST00000460162 ESPNB1AK53 854 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 TMCC2O75069 709 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 PRKD3O94806 890 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 GUSBP08236 651 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 DHRS4L1P0CG22 281 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 RPL14P50914 215 aaKnown RBP20.27■□□□□ 0.84
PTPN4-207ENST00000460162 RAC3P60763 192 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 GPR68Q15743 365 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 HEPHL1Q6MZM0 1159 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 PLEKHM3Q6ZWE6 761 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 C16orf62Q7Z3J2 963 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 IGFBPL1Q8WX77 278 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 PLPPR2Q96GM1 343 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 COX4I2Q96KJ9 171 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 SMR3AQ99954 134 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 TMEM204Q9BSN7 226 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 HDHD5Q9BXW7 423 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 LAT2Q9GZY6 243 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 OR51I1Q9H343 314 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 KLHL9Q9P2J3 617 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 KCNE5Q9UJ90 142 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 HAO1Q9UJM8 370 aa20.27■□□□□ 0.84
PTPN4-207ENST00000460162 KIAA0513O60268 411 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 UGT2B17O75795 530 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 CSTAP01040 98 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 YES1P07947 543 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 ANXA8L1Q5VT79 327 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 NUFIP2Q7Z417 695 aaKnown RBP20.26■□□□□ 0.83
PTPN4-207ENST00000460162 YTHDF3Q7Z739 585 aaKnown RBP20.26■□□□□ 0.83
PTPN4-207ENST00000460162 CLEC4FQ8N1N0 589 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 ATP6V1C2Q8NEY4 427 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 VPS37AQ8NEZ2 397 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 S100PBPQ96BU1 408 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 ZNF524Q96C55 264 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 SORT1Q99523 831 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 C20orf27Q9GZN8 174 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 BCO1Q9HAY6 547 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 POLE3Q9NRF9 147 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.26■□□□□ 0.83
PTPN4-207ENST00000460162 V9GYY5 206 aaPredicted RBP20.26■□□□□ 0.83
PTPN4-207ENST00000460162 FREM1Q5H8C1 2179 aa20.26■□□□□ 0.83
PTPN4-207ENST00000460162 CENPVL1A0A0U1RR11 272 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 PRSS51A0A1B0GVH4 220 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 FCMRO60667 390 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 SCN2BO60939 215 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 HEXAP06865 529 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 UQCRC2P22695 453 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 IL32P24001 234 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 SLC1A6P48664 564 aa20.25■□□□□ 0.83
PTPN4-207ENST00000460162 CLNS1AP54105 237 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms