RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 ESPL1Q14674 2120 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 NPIPA5A0A0B4J1W7 369 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 C2orf72A6NCS6 295 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 NPIPA7E9PJI5 369 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 FMO6PO60774 539 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 NPIPA8P0DM63 369 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 POLR2HP52434 150 aaKnown RBP9.68□□□□□ -0.86
UBR4-208ENST00000459947 CSNK2A1P68400 391 aaPredicted RBP9.68□□□□□ -0.86
UBR4-208ENST00000459947 HSF1Q00613 529 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 WBP2NLQ6ICG8 309 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 FJX1Q86VR8 437 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 RANBP3LQ86VV4 465 aaPredicted RBP9.68□□□□□ -0.86
UBR4-208ENST00000459947 ARMC8Q8IUR7 673 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 ARHGAP24Q8N264 748 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 RCN3Q96D15 328 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 KLHL15Q96M94 604 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 ZNF559Q9BR84 538 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 PIGMQ9H3S5 423 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 EML6Q6ZMW3 1958 aa9.68□□□□□ -0.86
UBR4-208ENST00000459947 CDHR4A6H8M9 788 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 MBD3L4A6NDZ8 208 aaPredicted RBP9.67□□□□□ -0.86
UBR4-208ENST00000459947 MBD3L3A6NE82 208 aaPredicted RBP9.67□□□□□ -0.86
UBR4-208ENST00000459947 MBD3L5A6NJ08 208 aaPredicted RBP9.67□□□□□ -0.86
UBR4-208ENST00000459947 NTN1O95631 604 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 PRKCAP17252 672 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 IFNA8P32881 189 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 PCYT1AP49585 367 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 EPS8Q12929 822 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 OR2V1Q8NHB1 315 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 MBD3L2Q8NHZ7 208 aaPredicted RBP9.67□□□□□ -0.86
UBR4-208ENST00000459947 LZICQ8WZA0 190 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 PNPLA3Q9NST1 481 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 DNAJB12Q9NXW2 375 aaKnown RBP9.67□□□□□ -0.86
UBR4-208ENST00000459947 ADAM21Q9UKJ8 722 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 NUP214P35658 2090 aaPredicted RBP9.67□□□□□ -0.86
UBR4-208ENST00000459947 DVL2O14641 736 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 CYP7B1O75881 506 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 UBTFL6P0CB48 400 aaPredicted RBP9.67□□□□□ -0.86
UBR4-208ENST00000459947 OPRM1P35372 400 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 CLDN18P56856 261 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 MRPL2Q5T653 305 aaKnown RBP9.67□□□□□ -0.86
UBR4-208ENST00000459947 ZNF836Q6ZNA1 936 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 CALHM3Q86XJ0 350 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 ZZZ3Q8IYH5 903 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 CHST11Q9NPF2 352 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 SLC9A8Q9Y2E8 581 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 HDGFL3Q9Y3E1 203 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 ATRXP46100 2492 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 ZFYVE26Q68DK2 2539 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 ZNF208O43345 1280 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 OR5M10Q6IEU7 315 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 GALNT10Q86SR1 603 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 MICU2Q8IYU8 434 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 CPNE4Q96A23 557 aaPredicted RBP9.67□□□□□ -0.86
UBR4-208ENST00000459947 CCDC120Q96HB5 630 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 TTYH2Q9BSA4 534 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 SFXN3Q9BWM7 321 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 PIF1Q9H611 641 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 TINAGQ9UJW2 476 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 NINQ8N4C6 2090 aa9.67□□□□□ -0.86
UBR4-208ENST00000459947 ITPR1Q14643 2758 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 LOC100653049A0A140TA62 436 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 PRAMEF27A3QJZ7 478 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 KRT34O76011 436 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 CLDN14O95500 239 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 CASP9P55211 416 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 FOXF1Q12946 379 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 SWT1Q5T5J6 900 aaKnown RBP9.66□□□□□ -0.86
UBR4-208ENST00000459947 PLEKHM3Q6ZWE6 761 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 SLC43A2Q8N370 569 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 OR2T12Q8NG77 320 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 FBXO27Q8NI29 283 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 DNAJA4Q8WW22 397 aaPredicted RBP9.66□□□□□ -0.86
UBR4-208ENST00000459947 DDIT4LQ96D03 193 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 VDAC3Q9Y277 283 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 RPH3AQ9Y2J0 694 aaPredicted RBP9.66□□□□□ -0.86
UBR4-208ENST00000459947 FXYD1O00168 92 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 SLC7A1P30825 629 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 CEACAM8P31997 349 aaPredicted RBP9.66□□□□□ -0.86
UBR4-208ENST00000459947 SLC1A3P43003 542 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 PCBP3P57721 371 aaKnown RBP9.66□□□□□ -0.86
UBR4-208ENST00000459947 NUP107P57740 925 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 MTPNP58546 118 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 CAPRIN1Q14444 709 aaKnown RBP9.66□□□□□ -0.86
UBR4-208ENST00000459947 SGCBQ16585 318 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 MRGPRGQ86SM5 289 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 MUC13Q9H3R2 512 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 TMEM27Q9HBJ8 222 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 ARMCX1Q9P291 453 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 KCNE5Q9UJ90 142 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 ELOVL7A1L3X0 281 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 AIM2O14862 343 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 GSTA4O15217 222 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 ZIC2O95409 532 aaPredicted RBP9.66□□□□□ -0.86
UBR4-208ENST00000459947 GLI4P10075 376 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 PNMTP11086 282 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 NUDT2P50583 147 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 MERTKQ12866 999 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 MAPK14Q16539 360 aa9.66□□□□□ -0.86
UBR4-208ENST00000459947 ADGRE4PQ86SQ3 457 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms