RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 ZFYVE1Q9HBF4 777 aa6.38□□□□□ -1.39
CUBNP3-201ENST00000457461 POPDC3Q9HBV1 291 aa6.38□□□□□ -1.39
CUBNP3-201ENST00000457461 FAM118AQ9NWS6 357 aa6.38□□□□□ -1.39
CUBNP3-201ENST00000457461 KLHL28Q9NXS3 571 aa6.38□□□□□ -1.39
CUBNP3-201ENST00000457461 FKBPLQ9UIM3 349 aa6.38□□□□□ -1.39
CUBNP3-201ENST00000457461 OR52A1Q9UKL2 312 aa6.38□□□□□ -1.39
CUBNP3-201ENST00000457461 PCDHA9Q9Y5H5 950 aa6.38□□□□□ -1.39
CUBNP3-201ENST00000457461 ANKRD12Q6UB98 2062 aa6.38□□□□□ -1.39
CUBNP3-201ENST00000457461 EDDM13A0A1B0GTR0 161 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 URADA6NGE7 173 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 BBIP1A8MTZ0 92 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 MBTPS2O43462 519 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 RGS10O43665 173 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 LEFTY1O75610 366 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 GLCEO94923 617 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 MT-ND4LP03901 98 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 LPLP06858 475 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 FGF3P11487 239 aaPredicted RBP6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 CYP4B1P13584 511 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 MAGP20916 626 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 FMO3P31513 532 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 SHMT2P34897 504 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 CAPZBP47756 277 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 CDX1P47902 265 aaPredicted RBP6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 IRF3Q14653 427 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 SF3A2Q15428 464 aaKnown RBP6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 ITPRIPL2Q3MIP1 535 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 EOGTQ5NDL2 527 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 CES4AQ5XG92 561 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 GLYATQ6IB77 296 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 PSAPL1Q6NUJ1 521 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 ZNF549Q6P9A3 640 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 HSDL2Q6YN16 418 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 TAF8Q7Z7C8 310 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 RANBP3LQ86VV4 465 aaPredicted RBP6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 SLC41A1Q8IVJ1 513 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 DCUN1D3Q8IWE4 304 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 PIANPQ8IYJ0 282 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 OR5T3Q8NGG3 340 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 OR1N1Q8NGS0 311 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 BBS10Q8TAM1 723 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 CD300LFQ8TDQ1 290 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 ZDHHC1Q8WTX9 485 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 OIT3Q8WWZ8 545 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 CMTM7Q96FZ5 175 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 ATXN7L3BQ96GX2 97 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 INTS14Q96SY0 518 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 ZFYVE21Q9BQ24 234 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 AARSD1Q9BTE6 412 aaKnown RBP6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 RPP25Q9BUL9 199 aaKnown RBP6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 BEX2Q9BXY8 128 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 RBCK1Q9BYM8 510 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 CIPCQ9C0C6 399 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 C20orf27Q9GZN8 174 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 PCED1AQ9H1Q7 454 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 PPP1R3EQ9H7J1 279 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 CHST11Q9NPF2 352 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 TMEM138Q9NPI0 162 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 GTSE1Q9NYZ3 720 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 THAP10Q9P2Z0 257 aaPredicted RBP6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 IL36AQ9UHA7 158 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 CD207Q9UJ71 328 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 ZNF490Q9ULM2 529 aaPredicted RBP6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 NDRG4Q9ULP0 352 aaKnown RBP6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 AURKCQ9UQB9 309 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 PKP3Q9Y446 797 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 TRPM6Q9BX84 2022 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 PRUNE2Q8WUY3 3088 aa6.37□□□□□ -1.39
CUBNP3-201ENST00000457461 A0A087X1B8 175 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 A0A0A6YYH2 397 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 TCRBV21S2A2A0A5A6 115 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 TMEM72A0PK05 275 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 A6NJ64 397 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 COLCA2A8K830 154 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CDRT15L2A8MXV6 281 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 UPK3BL1B0FP48 263 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 UPK3BL2E5RIL1 263 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 INMT-MINDY4F8WBC2 141 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 SYT5O00445 386 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 PLA2G10O15496 165 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 XPNPEP2O43895 674 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 NPHS1O60500 1241 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CDC14BO60729 498 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 SPDEFO95238 335 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CLDN7O95471 211 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ONECUT2O95948 504 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 CFDP00746 253 aaPredicted RBP6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 SERPINA3P01011 423 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 C1SP09871 688 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 SBK3P0C264 359 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 NBEAP1P0C6P0 100 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 OR8U8P0C7N1 319 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 PRSS56P0CW18 603 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 BPIP17213 487 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 TBXA2RP21731 343 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 MC4RP32245 332 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 MNDAP41218 407 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 TTPAP49638 278 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 ATP4BP51164 291 aa6.36□□□□□ -1.39
CUBNP3-201ENST00000457461 RORCP51449 518 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms