RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 SAGP10523 405 aaPredicted RBP15.39■□□□□ 0.05
CCDC43-202ENST00000457422 GALP22466 123 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 PSMD4P55036 377 aaKnown RBP15.39■□□□□ 0.05
CCDC43-202ENST00000457422 BTG2P78543 158 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 FUT7Q11130 342 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 TDGQ13569 410 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 ZNF267Q14586 743 aaPredicted RBP15.39■□□□□ 0.05
CCDC43-202ENST00000457422 SLC35F1Q5T1Q4 408 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 LINC00114Q6XXX2 140 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 ZNF550Q7Z398 422 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 CMIPQ8IY22 773 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 METTL27Q8N6F8 245 aaPredicted RBP15.39■□□□□ 0.05
CCDC43-202ENST00000457422 ACBD7Q8N6N7 88 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 OR51G2Q8NGK0 314 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 SETD6Q8TBK2 473 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 G6PC3Q9BUM1 346 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 MIR1-1HGQ9H1L0 117 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 Q9N2J8 555 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 ASB6Q9NWX5 421 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 IRAK4Q9NWZ3 460 aa15.39■□□□□ 0.05
CCDC43-202ENST00000457422 SPTBP11277 2137 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 ZC3H12DA2A288 527 aaKnown RBP15.38■□□□□ 0.05
CCDC43-202ENST00000457422 SYNDIG1LA6NDD5 238 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 DLGAP3O95886 979 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 HLA-DPB1P04440 258 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 MAOBP27338 520 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 GALNSP34059 522 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 MLLT3P42568 568 aaPredicted RBP15.38■□□□□ 0.05
CCDC43-202ENST00000457422 PPM1FP49593 454 aaPredicted RBP15.38■□□□□ 0.05
CCDC43-202ENST00000457422 GFERP55789 205 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 HSD17B7P56937 341 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 GPR50Q13585 617 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 B3GLCTQ6Y288 498 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 SYT14Q8NB59 555 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 RCBTB1Q8NDN9 531 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 AP3S1Q92572 193 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 SPACA7Q96KW9 195 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 IFT27Q9BW83 186 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 INPP5EQ9NRR6 644 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 POLHQ9Y253 713 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 SLC35A3Q9Y2D2 325 aa15.38■□□□□ 0.05
CCDC43-202ENST00000457422 TRAV27A0A087WT01 109 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 FITM1A5D6W6 292 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 SLC22A31A6NKX4 558 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 CT45A8P0DMV1 189 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 CT45A9P0DMV2 189 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 MAOAP21397 527 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 ATP12AP54707 1039 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 ZNF79Q15937 498 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 CT45A2Q5DJT8 189 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 TCTE1Q5JU00 501 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 VASNQ6EMK4 673 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 SLC37A3Q8NCC5 494 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 DNAJA4Q8WW22 397 aaPredicted RBP15.37■□□□□ 0.05
CCDC43-202ENST00000457422 NACC2Q96BF6 587 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 TMCO6Q96DC7 493 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 TGM7Q96PF1 710 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 HCAR1Q9BXC0 346 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 SRRQ9GZT4 340 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 PCED1AQ9H1Q7 454 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 MIXL1Q9H2W2 232 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 CCDC182A6NF36 153 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 TLCD2A6NGC4 264 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 C12orf71A8MTZ7 269 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 PRR23D1E9PI22 279 aaPredicted RBP15.37■□□□□ 0.05
CCDC43-202ENST00000457422 H0YIG0 161 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 AQP9O43315 295 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 PRR23D2P0DMB1 279 aaPredicted RBP15.37■□□□□ 0.05
CCDC43-202ENST00000457422 SPNP16150 400 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 CELP19835 753 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 FNTBP49356 437 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 RACK1P63244 317 aaKnown RBP15.37■□□□□ 0.05
CCDC43-202ENST00000457422 NNATQ16517 81 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 GLYR1Q49A26 553 aaPredicted RBP15.37■□□□□ 0.05
CCDC43-202ENST00000457422 ALG10BQ5I7T1 473 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 ZNF362Q5T0B9 420 aaPredicted RBP15.37■□□□□ 0.05
CCDC43-202ENST00000457422 ULK3Q6PHR2 472 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 GDPD3Q7L5L3 318 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 PTP4A1Q93096 173 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 MMABQ96EY8 250 aaPredicted RBP15.37■□□□□ 0.05
CCDC43-202ENST00000457422 TIMP4Q99727 224 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 PELOQ9BRX2 385 aaKnown RBP15.37■□□□□ 0.05
CCDC43-202ENST00000457422 RAB33BQ9H082 229 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 ABCB9Q9NP78 766 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 SOHLH2Q9NX45 425 aa15.37■□□□□ 0.05
CCDC43-202ENST00000457422 EFCAB7A8K855 629 aa15.36■□□□□ 0.05
CCDC43-202ENST00000457422 GABRPO00591 440 aa15.36■□□□□ 0.05
CCDC43-202ENST00000457422 APOA1P02647 267 aa15.36■□□□□ 0.05
CCDC43-202ENST00000457422 NGFRP08138 427 aa15.36■□□□□ 0.05
CCDC43-202ENST00000457422 PGDP52209 483 aa15.36■□□□□ 0.05
CCDC43-202ENST00000457422 CD300CQ08708 224 aa15.36■□□□□ 0.05
CCDC43-202ENST00000457422 DBPQ10586 325 aaPredicted RBP15.36■□□□□ 0.05
CCDC43-202ENST00000457422 BIKQ13323 160 aa15.36■□□□□ 0.05
CCDC43-202ENST00000457422 FHL1Q13642 323 aa15.36■□□□□ 0.05
CCDC43-202ENST00000457422 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.36■□□□□ 0.05
CCDC43-202ENST00000457422 DDI2Q5TDH0 399 aa15.36■□□□□ 0.05
CCDC43-202ENST00000457422 DESI1Q6ICB0 168 aa15.36■□□□□ 0.05
CCDC43-202ENST00000457422 RTL4Q6ZR62 310 aa15.36■□□□□ 0.05
CCDC43-202ENST00000457422 ATP6V1C2Q8NEY4 427 aa15.36■□□□□ 0.05
CCDC43-202ENST00000457422 CADM4Q8NFZ8 388 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms