RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ZNF649Q9BS31 505 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 DPH1Q9BZG8 443 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 PARPBPQ9NWS1 579 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 ASIC5Q9NY37 505 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 EEF1E1O43324 174 aaKnown RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 FMO6PO60774 539 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 MT-ATP6P00846 226 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 JUNP05412 331 aaKnown RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 OR10A3P58181 314 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF776Q68DI1 518 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 KIAA0895LQ68EN5 471 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 ACOT7LQ6ZUV0 252 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF546Q86UE3 836 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 RPUSD4Q96CM3 377 aaKnown RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 SH3YL1Q96HL8 342 aaPredicted RBP4.93□□□□□ -1.62
CSMD3-204ENST00000455883 SUSD3Q96L08 255 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 OR2M4Q96R27 311 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 ARNT2Q9HBZ2 717 aa4.93□□□□□ -1.62
CSMD3-204ENST00000455883 ARPC5O15511 151 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ADRB2P07550 413 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 STAG3L3P0CL85 134 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 MGMTP16455 207 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 NT5EP21589 574 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ARRB1P49407 418 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 RPS21P63220 83 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 SLC25A11Q02978 314 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 RAPSNQ13702 412 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 DPY19L2P2Q6ZN68 376 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ERASQ7Z444 233 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 OR14L1PQ8NHC6 308 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 EXOSC8Q96B26 276 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 FAM136AQ96C01 138 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 IMP4Q96G21 291 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ATP5SQ99766 215 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 OR10A5Q9H207 317 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 OR10A2Q9H208 303 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 B3GAT1Q9P2W7 334 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TRABD2BA6NFA1 517 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 OR1F1O43749 312 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ADAMTS4O75173 837 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 IRF1P10914 325 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 MTPNP58546 118 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PON2Q15165 354 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 GUK1Q16774 197 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 CPZQ66K79 652 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 NAA40Q86UY6 237 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 FAM83FQ8NEG4 500 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 OR6M1Q8NGM8 313 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 CXorf58Q96LI9 332 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 KREMEN1Q96MU8 473 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 POP1Q99575 1024 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 C1QTNF2Q9BXJ5 285 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PKIBQ9C010 78 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 UBQLN3Q9H347 655 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PCTPQ9UKL6 214 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM82A0PJX8 343 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 METTL15A6NJ78 407 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 S1PR4O95977 384 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PLGP00747 810 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 VTNP04004 478 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 AQP6Q13520 282 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 CTF1Q16619 201 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM183BQ1AE95 376 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF678Q5SXM1 525 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 C4orf32Q8N8J7 132 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF75AQ96N20 296 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 MUS81Q96NY9 551 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 CDCA4Q9BXL8 241 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 EPHX3Q9H6B9 360 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PIH1D1Q9NWS0 290 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 STRCP1A6NGW2 1772 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 A0A1B0GUH1 482 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PEX12O00623 359 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF254O75437 659 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 CLEC3AO75596 197 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 DDAH2O95865 285 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 CDK4P11802 303 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PSMB3P49720 205 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TMEM115Q12893 351 aaPredicted RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ILKQ13418 452 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TPBGQ13641 420 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 KIR2DS3Q14952 304 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 GTDC1Q4AE62 458 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF691Q5VV52 312 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF620Q6ZNG0 422 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TMPRSS12Q86WS5 348 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ZFP82Q8N141 532 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 SLC29A1Q99808 456 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 POLDIP3Q9BY77 421 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 SMOXQ9NWM0 555 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 MRPL22Q9NWU5 206 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 GNG13Q9P2W3 67 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 PPIEQ9UNP9 301 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 A0A087WUU8 490 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 MSTNO14793 375 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 TOXO94900 526 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 SYNGR4O95473 234 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 BTF3P20290 206 aaKnown RBP4.92□□□□□ -1.62
CSMD3-204ENST00000455883 SEMA3BQ13214 749 aa4.92□□□□□ -1.62
CSMD3-204ENST00000455883 ZNF628Q5EBL2 1059 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms