RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 KCNMB2Q9Y691 235 aa4.51□□□□□ -1.69
RIF1-207ENST00000454583 ASH1LQ9NR48 2969 aaKnown RBP4.51□□□□□ -1.69
RIF1-207ENST00000454583 ANKRD11Q6UB99 2663 aaPredicted RBP4.51□□□□□ -1.69
RIF1-207ENST00000454583 CACNA1GO43497 2377 aa4.51□□□□□ -1.69
RIF1-207ENST00000454583 TRBV4-1A0A0J9YWV2 114 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 LOC102725191A0A1B0GVB3 256 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 CPED1A4D0V7 1026 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 EIF4E1BA6NMX2 242 aaKnown RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 K7ENP7 123 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 GFRA3O60609 400 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 RAD1O60671 282 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 PRAMEF2O60811 474 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 PPM1BO75688 479 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 IGHA1P01876 353 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 NTRK1P04629 796 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 IL7RP16871 459 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 CRISP3P54108 245 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 DSTNP60981 165 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 NFATC3Q12968 1075 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 SCARB2Q14108 478 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 AMZ1Q400G9 498 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 RNFT1Q5M7Z0 435 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 DCAF12Q5T6F0 453 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 INO80CQ6PI98 192 aaPredicted RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 Q6ZSR3 168 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 KCTD8Q6ZWB6 473 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 ARMC8Q8IUR7 673 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 GALNT4Q8N4A0 578 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 OR8D4Q8NGM9 314 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 OR6T1Q8NGN1 323 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 NFKBIDQ8NI38 313 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 PANX1Q96RD7 426 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 ZNF347Q96SE7 839 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 DPH1Q9BZG8 443 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 SLC39A1Q9NY26 324 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 RPS6KA6Q9UK32 745 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 EXOGQ9Y2C4 368 aaKnown RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 A0A087WXM4 84 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 NPIPB13A6NJU9 1138 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 NPIPB4C9JG80 1138 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 AP3D1O14617 1153 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 SH3BGRLO75368 114 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 BGLAPP02818 100 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 CDK1P06493 297 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 MPIP34949 423 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 PTGS2P35354 604 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 BUD31P41223 144 aaPredicted RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 TLE3Q04726 772 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 PRKCDQ05655 676 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 ZNF155Q12901 538 aaPredicted RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 NDUFA9Q16795 377 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 PLPPR5Q32ZL2 321 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 REEP3Q6NUK4 255 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 TUBA3EQ6PEY2 450 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 VRK2Q86Y07 508 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 SLC34A3Q8N130 599 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 DHRSXQ8N5I4 330 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 ESX1Q8N693 406 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 SLC5A8Q8N695 610 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 OR2M3Q8NG83 312 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 GGHQ92820 318 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 RIT1Q92963 219 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 SLC38A4Q969I6 547 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 ZNF75AQ96N20 296 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 OR2B2Q9GZK3 357 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 QRSL1Q9H0R6 528 aaKnown RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 MARCH7Q9H992 704 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 PCDHGA9Q9Y5G4 932 aaKnown RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 CORINQ9Y5Q5 1042 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 A3GALT2U3KPV4 340 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 CUL9Q8IWT3 2517 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 ANK2Q01484 3957 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 CELSR2Q9HCU4 2923 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 C17orf105B2RV13 164 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 NME2P1O60361 137 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 ICOSLGO75144 302 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 SRSF10O75494 262 aaKnown RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 ERAL1O75616 437 aaKnown RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 TXNDC12O95881 172 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 AK1P00568 194 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 IGHEP01854 428 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 NME2P22392 152 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 CFPP27918 469 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 CASP3P42574 277 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 SMN1Q16637 294 aaKnown RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 GLYR1Q49A26 553 aaPredicted RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 ZNF684Q5T5D7 378 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 JMJD6Q6NYC1 403 aaPredicted RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 CBLN3Q6UW01 205 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 GALNT12Q8IXK2 581 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 RBMXL3Q8N7X1 1067 aaKnown RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 CNIH3Q8TBE1 160 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 MAGEE2Q8TD90 523 aaPredicted RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 SKA2Q8WVK7 121 aaPredicted RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 FIG4Q92562 907 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 EXOSC8Q96B26 276 aaKnown RBP4.5□□□□□ -1.69
RIF1-207ENST00000454583 C3orf49Q96BT1 292 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 SIGLEC12Q96PQ1 595 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 FAIM2Q9BWQ8 316 aa4.5□□□□□ -1.69
RIF1-207ENST00000454583 LAT2Q9GZY6 243 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms