RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 SNX8Q9Y5X2 465 aa7.82□□□□□ -1.16
DEPDC1B-202ENST00000453022 ACTL7BQ9Y614 415 aa7.82□□□□□ -1.16
DEPDC1B-202ENST00000453022 GPC6Q9Y625 555 aaPredicted RBP7.82□□□□□ -1.16
DEPDC1B-202ENST00000453022 KCNE3Q9Y6H6 103 aa7.82□□□□□ -1.16
DEPDC1B-202ENST00000453022 ALPK2Q86TB3 2170 aa7.82□□□□□ -1.16
DEPDC1B-202ENST00000453022 HEATR1Q9H583 2144 aaKnown RBP7.82□□□□□ -1.16
DEPDC1B-202ENST00000453022 RNF212BA8MTL3 300 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 ESPNB1AK53 854 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 TMEM233B4DJY2 109 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 KIF2AO00139 706 aaPredicted RBP7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 ETV2O00321 342 aaPredicted RBP7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 AZIN1O14977 448 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 SCAMP2O15127 329 aaKnown RBP7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 SMAD9O15198 467 aaKnown RBP7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 GPRIN2O60269 458 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 H6PDO95479 791 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 HSPA4LO95757 839 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 SHBGP04278 402 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 TP53P04637 393 aaPredicted RBP7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 NEFHP12036 1026 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 BCKDHAP12694 445 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 CPA3P15088 417 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 COX5AP20674 150 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 PTNP21246 168 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 SUMO3P55854 103 aaPredicted RBP7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 C21orf58P58505 322 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 PCLAFQ15004 111 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 GALNTL6Q49A17 601 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 SLC25A53Q5H9E4 307 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 DCST2Q5T1A1 773 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 LIPMQ5VYY2 423 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 CDC73Q6P1J9 531 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 LRIG3Q6UXM1 1119 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 GSPT2Q8IYD1 628 aaKnown RBP7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 ZNF527Q8NB42 609 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 MNS1Q8NEH6 495 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 ATP6V1C2Q8NEY4 427 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 OR7A2PQ8NGA2 310 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 NANOS1Q8WY41 292 aaKnown RBP7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 MTERF3Q96E29 417 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 ZNF300Q96RE9 604 aaPredicted RBP7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 GATA5Q9BWX5 397 aaPredicted RBP7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 YAE1D1Q9NRH1 226 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 GPATCH2Q9NW75 528 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 GIMAP2Q9UG22 337 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 ATP6V1HQ9UI12 483 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 DNAJC15Q9Y5T4 150 aa7.81□□□□□ -1.16
DEPDC1B-202ENST00000453022 IGHV4-30-2A0A087WSY4 118 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 GOLGA8QA0A0J9YX86 632 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 GOLGA8OA6NCC3 632 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 GJE1A6NN92 205 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 C9JVG2 144 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 GOLGA8NF8WBI6 632 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 CYTIPO60759 359 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 LAMP1P11279 417 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 IGHV1-2P23083 117 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 CRHR1P34998 444 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 ASMTP46597 345 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 CDH11P55287 796 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 RAC3P60763 192 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 SPOCK1Q08629 439 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 SELENBP1Q13228 472 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 PPA1Q15181 289 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 QPRTQ15274 297 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 STK11Q15831 433 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 UGT3A2Q3SY77 523 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 C11orf71Q6IPW1 123 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 PODNL1Q6PEZ8 512 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 C10orf107Q8IVU9 208 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 SLC43A2Q8N370 569 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 RFWD2Q8NHY2 731 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 PSMA8Q8TAA3 256 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 ZNF75CPQ92670 426 aaPredicted RBP7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 ZNF775Q96BV0 537 aaPredicted RBP7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 CHMP6Q96FZ7 201 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 MRGPRX4Q96LA9 322 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 HS6ST2Q96MM7 605 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 ACTRT3Q9BYD9 372 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 GRIP2Q9C0E4 1043 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 QRSL1Q9H0R6 528 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 CISD1Q9NZ45 108 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 KLHL9Q9P2J3 617 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 B3GALT5Q9Y2C3 310 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 TMED5Q9Y3A6 229 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 MALRD1Q5VYJ5 2156 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 ARFGEF3Q5TH69 2177 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 CENPVL1A0A0U1RR11 272 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 ABCD4O14678 606 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 PIP5K1BO14986 540 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 SSX4O60224 188 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 C6orf47O95873 294 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 CHRNGP07510 517 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 ATP6V1C1P21283 382 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 SLC7A1P30825 629 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 HPCAL1P37235 193 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 CCT3P49368 545 aaKnown RBP7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 ATP12AP54707 1039 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 IRX1P78414 480 aaPredicted RBP7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 RASGEF1BQ0VAM2 473 aa7.8□□□□□ -1.16
DEPDC1B-202ENST00000453022 SKP2Q13309 424 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms